BLASTX nr result

ID: Panax21_contig00025283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025283
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272103.1| PREDICTED: protein GDAP2 homolog [Vitis vini...   249   2e-64
ref|XP_002315014.1| predicted protein [Populus trichocarpa] gi|2...   248   5e-64
emb|CBI27253.3| unnamed protein product [Vitis vinifera]              244   5e-63
ref|XP_002523433.1| ganglioside induced differentiation associat...   244   7e-63
ref|XP_002312275.1| predicted protein [Populus trichocarpa] gi|2...   244   7e-63

>ref|XP_002272103.1| PREDICTED: protein GDAP2 homolog [Vitis vinifera]
          Length = 560

 Score =  249 bits (635), Expect = 2e-64
 Identities = 125/155 (80%), Positives = 135/155 (87%)
 Frame = -1

Query: 467 ISKLPADVGDENGETTLDERKIRIXXXXXXXXXXXXXPQTLMDLPVSEVGLVRRNSSYLD 288
           +SKLPADVGDENGET +DERKIRI              +  +DLPVS+VGL+RRNSSYLD
Sbjct: 263 MSKLPADVGDENGETIIDERKIRIKPLPKKTAPKPP--KAPVDLPVSDVGLIRRNSSYLD 320

Query: 287 SYLDPGFMSLIKDPDQRRKEQWEKTAQAQSGWNFTKMIGYGDLGGPPLSAAEEYSLHSRY 108
           SYLDP FMSLIKDPDQRRKEQWEKTAQAQSGWN  K++G+GDLGGPPLSAAEEYSLHSRY
Sbjct: 321 SYLDPAFMSLIKDPDQRRKEQWEKTAQAQSGWNCAKLLGFGDLGGPPLSAAEEYSLHSRY 380

Query: 107 LSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG 3
           LSKANSLNLSEIAEMKIVYRGGVDSEGRP+MVVVG
Sbjct: 381 LSKANSLNLSEIAEMKIVYRGGVDSEGRPIMVVVG 415


>ref|XP_002315014.1| predicted protein [Populus trichocarpa] gi|222864054|gb|EEF01185.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  248 bits (632), Expect = 5e-64
 Identities = 127/155 (81%), Positives = 133/155 (85%)
 Frame = -1

Query: 467 ISKLPADVGDENGETTLDERKIRIXXXXXXXXXXXXXPQTLMDLPVSEVGLVRRNSSYLD 288
           ISKLPADVGDENGET +DERKIRI              Q   DLPVS+VGLVRRNSSYLD
Sbjct: 264 ISKLPADVGDENGETIIDERKIRIKPLPKKNIPRPP--QPPADLPVSDVGLVRRNSSYLD 321

Query: 287 SYLDPGFMSLIKDPDQRRKEQWEKTAQAQSGWNFTKMIGYGDLGGPPLSAAEEYSLHSRY 108
           SYLDP FMSLIKDPDQRRKEQWEK+AQAQSGWN  KM+G+GDLGGPPLSAAEEYSLHSRY
Sbjct: 322 SYLDPAFMSLIKDPDQRRKEQWEKSAQAQSGWNCAKMLGFGDLGGPPLSAAEEYSLHSRY 381

Query: 107 LSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG 3
           L+KANSLNLSEIAEMKIVYRGGVDSEG PVMVVVG
Sbjct: 382 LAKANSLNLSEIAEMKIVYRGGVDSEGHPVMVVVG 416


>emb|CBI27253.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  244 bits (623), Expect = 5e-63
 Identities = 125/156 (80%), Positives = 135/156 (86%), Gaps = 1/156 (0%)
 Frame = -1

Query: 467 ISKLPADVGDENGETTLDERKIRIXXXXXXXXXXXXXPQTLMDLPVSEVGLVRR-NSSYL 291
           +SKLPADVGDENGET +DERKIRI              +  +DLPVS+VGL+RR NSSYL
Sbjct: 263 MSKLPADVGDENGETIIDERKIRIKPLPKKTAPKPP--KAPVDLPVSDVGLIRRRNSSYL 320

Query: 290 DSYLDPGFMSLIKDPDQRRKEQWEKTAQAQSGWNFTKMIGYGDLGGPPLSAAEEYSLHSR 111
           DSYLDP FMSLIKDPDQRRKEQWEKTAQAQSGWN  K++G+GDLGGPPLSAAEEYSLHSR
Sbjct: 321 DSYLDPAFMSLIKDPDQRRKEQWEKTAQAQSGWNCAKLLGFGDLGGPPLSAAEEYSLHSR 380

Query: 110 YLSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG 3
           YLSKANSLNLSEIAEMKIVYRGGVDSEGRP+MVVVG
Sbjct: 381 YLSKANSLNLSEIAEMKIVYRGGVDSEGRPIMVVVG 416


>ref|XP_002523433.1| ganglioside induced differentiation associated protein, putative
           [Ricinus communis] gi|223537323|gb|EEF38953.1|
           ganglioside induced differentiation associated protein,
           putative [Ricinus communis]
          Length = 561

 Score =  244 bits (622), Expect = 7e-63
 Identities = 124/155 (80%), Positives = 132/155 (85%)
 Frame = -1

Query: 467 ISKLPADVGDENGETTLDERKIRIXXXXXXXXXXXXXPQTLMDLPVSEVGLVRRNSSYLD 288
           I+KLP+DVGDENGET +DERKIRI              Q   DLPVS VGLVRRNSSYLD
Sbjct: 264 IAKLPSDVGDENGETIIDERKIRIKPLPKKTIPKPP--QAEADLPVSNVGLVRRNSSYLD 321

Query: 287 SYLDPGFMSLIKDPDQRRKEQWEKTAQAQSGWNFTKMIGYGDLGGPPLSAAEEYSLHSRY 108
           SYLDP FMSLIKDPDQRRKEQWEKTAQAQSGWN  K++G+G+LGGPPLS AEEYSLHSRY
Sbjct: 322 SYLDPAFMSLIKDPDQRRKEQWEKTAQAQSGWNCAKLLGFGNLGGPPLSVAEEYSLHSRY 381

Query: 107 LSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG 3
           L+KANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG
Sbjct: 382 LAKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG 416


>ref|XP_002312275.1| predicted protein [Populus trichocarpa] gi|222852095|gb|EEE89642.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  244 bits (622), Expect = 7e-63
 Identities = 125/155 (80%), Positives = 132/155 (85%)
 Frame = -1

Query: 467 ISKLPADVGDENGETTLDERKIRIXXXXXXXXXXXXXPQTLMDLPVSEVGLVRRNSSYLD 288
           I+KLPADVGDENGET +DERKIRI              Q L DLPV +VGLVRRNSSYLD
Sbjct: 264 IAKLPADVGDENGETIIDERKIRIKPLPKKNIPRPS--QPLADLPVIDVGLVRRNSSYLD 321

Query: 287 SYLDPGFMSLIKDPDQRRKEQWEKTAQAQSGWNFTKMIGYGDLGGPPLSAAEEYSLHSRY 108
           SYLDP FMS+IKDPDQRRKEQWEKTAQAQSGWN  K+ G+GDLGGP LSAAEEYSLHSRY
Sbjct: 322 SYLDPAFMSVIKDPDQRRKEQWEKTAQAQSGWNCAKIFGFGDLGGPTLSAAEEYSLHSRY 381

Query: 107 LSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG 3
           L+KANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG
Sbjct: 382 LAKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVG 416


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