BLASTX nr result

ID: Panax21_contig00025282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025282
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]   149   6e-34
ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   149   1e-33
ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   147   2e-33
gb|AAQ10672.1| type II CPD photolyase [Stellaria longipes]            146   5e-33
ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32

>emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]
          Length = 514

 Score =  149 bits (377), Expect = 6e-34
 Identities = 66/80 (82%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   YEIDGRDPNGYVGCMWSICGVHDQGWKERAVFGKIRYMNFAGCKRKFDVDGYIAYVKRLL 182
           YEIDGRDPNGYVGCMWSICGVHDQGW+ER +FGKIRYMN+AGCKRKFDVDGYIAYVKRL+
Sbjct: 434 YEIDGRDPNGYVGCMWSICGVHDQGWQERQIFGKIRYMNYAGCKRKFDVDGYIAYVKRLV 493

Query: 183 GDIKKRKGETLLNNKAKELR 242
            + KKRK E+ L  +AKELR
Sbjct: 494 TETKKRKAESSLGKEAKELR 513


>ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
           gi|449517475|ref|XP_004165771.1| PREDICTED:
           deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
           gi|13383259|dbj|BAB39480.1| CPD photolyase [Cucumis
           sativus] gi|20387244|dbj|BAB91322.1| CPD photolyase
           [Cucumis sativus]
          Length = 489

 Score =  149 bits (375), Expect = 1e-33
 Identities = 69/81 (85%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   YEIDGRDPNGYVGCMWSICGVHDQGWKERAVFGKIRYMNFAGCKRKFDVDGYIAYVKRLL 182
           YEIDGRDPNGYVGCMWSICGVHDQGWKER VFGKIRYMN+AGCKRKFDVDGYIAYVKRL+
Sbjct: 408 YEIDGRDPNGYVGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRLV 467

Query: 183 GDIKKRK-GETLLNNKAKELR 242
           G+IKKRK  ETL + K K +R
Sbjct: 468 GEIKKRKPEETLEDRKPKGIR 488


>ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Vitis vinifera]
          Length = 485

 Score =  147 bits (372), Expect = 2e-33
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   YEIDGRDPNGYVGCMWSICGVHDQGWKERAVFGKIRYMNFAGCKRKFDVDGYIAYVKRLL 182
           YEIDGRDPNGYVGCMWSICGVHDQGW+ER +FGKIRYMN+AGCKRKFDVDGYIA+VKRL+
Sbjct: 405 YEIDGRDPNGYVGCMWSICGVHDQGWQERQIFGKIRYMNYAGCKRKFDVDGYIAHVKRLV 464

Query: 183 GDIKKRKGETLLNNKAKELR 242
            + KKRK E+ L  +AKELR
Sbjct: 465 TETKKRKAESSLGKEAKELR 484


>gb|AAQ10672.1| type II CPD photolyase [Stellaria longipes]
          Length = 499

 Score =  146 bits (369), Expect = 5e-33
 Identities = 62/80 (77%), Positives = 72/80 (90%)
 Frame = +3

Query: 3   YEIDGRDPNGYVGCMWSICGVHDQGWKERAVFGKIRYMNFAGCKRKFDVDGYIAYVKRLL 182
           YEI GRDPNGYVGCMWSICG+HDQGWKER VFGKIRYMN+AGCKRKFDVDGYI+Y+K+L+
Sbjct: 412 YEIAGRDPNGYVGCMWSICGIHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYISYIKKLV 471

Query: 183 GDIKKRKGETLLNNKAKELR 242
           G+ KKRK +T L   AK++R
Sbjct: 472 GETKKRKADTQLGRNAKDIR 491


>ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|222871087|gb|EEF08218.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  144 bits (364), Expect = 2e-32
 Identities = 62/79 (78%), Positives = 70/79 (88%)
 Frame = +3

Query: 3   YEIDGRDPNGYVGCMWSICGVHDQGWKERAVFGKIRYMNFAGCKRKFDVDGYIAYVKRLL 182
           YEIDGRDP GYVGCMWSICG+HDQGWKER +FGKIRYMN+AGCKRKF+VDGYI YVKR++
Sbjct: 423 YEIDGRDPGGYVGCMWSICGIHDQGWKERPIFGKIRYMNYAGCKRKFNVDGYITYVKRIV 482

Query: 183 GDIKKRKGETLLNNKAKEL 239
           GD+KKRK E  L+   KEL
Sbjct: 483 GDMKKRKAENELHKTMKEL 501


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