BLASTX nr result

ID: Panax21_contig00025280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025280
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40724.3| unnamed protein product [Vitis vinifera]              107   1e-21
emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]   107   1e-21
ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244...   104   8e-21
ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245...    89   3e-16
ref|NP_173490.1| DNA-binding bromodomain-containing protein [Ara...    85   7e-15

>emb|CBI40724.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  107 bits (266), Expect = 1e-21
 Identities = 71/145 (48%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
 Frame = +3

Query: 87  SPNLNRRSTRRN-------PSPELGXXXXXXXXXXXXXXXXXXPQSIQQQRQHFDDLHKS 245
           +PN  RRSTRR+       P+P+                     +      Q+   L  S
Sbjct: 46  NPNSTRRSTRRSAKVDEILPAPDWIEGVGDDDDERKEKKLKLLRRLSPNHTQNPGSLPNS 105

Query: 246 SSLNSVSGTSDSGDEGENPGESSKKRKINAVTDRSEDNIGTDQEEKVTIATDTLNGSPLE 425
            SL+SVS  S+S  + ENP  S KKRKINAV D S  +   ++EEKV  ATDT  GS LE
Sbjct: 106 VSLHSVSYASNSNADVENPEASLKKRKINAVGDGS-GHTTAEKEEKVAKATDTPQGSRLE 164

Query: 426 SGPTTPLPDKKLLVFILDRLQKKDT 500
           SGPTTPLPDKKLLVFILDRLQKKDT
Sbjct: 165 SGPTTPLPDKKLLVFILDRLQKKDT 189


>emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]
          Length = 688

 Score =  107 bits (266), Expect = 1e-21
 Identities = 71/145 (48%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
 Frame = +3

Query: 87  SPNLNRRSTRRN-------PSPELGXXXXXXXXXXXXXXXXXXPQSIQQQRQHFDDLHKS 245
           +PN  RRSTRR+       P+P+                     +      Q+   L  S
Sbjct: 40  NPNSTRRSTRRSAKVDEILPAPDWIEGVGDDDDERKEKKLKLLRRLSPNHTQNPGSLPNS 99

Query: 246 SSLNSVSGTSDSGDEGENPGESSKKRKINAVTDRSEDNIGTDQEEKVTIATDTLNGSPLE 425
            SL+SVS  S+S  + ENP  S KKRKINAV D S      ++EEKV+ ATDT  GS LE
Sbjct: 100 VSLHSVSYASNSNADVENPEASLKKRKINAVGDGSGXTTA-EKEEKVSKATDTPQGSRLE 158

Query: 426 SGPTTPLPDKKLLVFILDRLQKKDT 500
           SGPTTPLPDKKLLVFILDRLQKKDT
Sbjct: 159 SGPTTPLPDKKLLVFILDRLQKKDT 183


>ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244510 [Vitis vinifera]
          Length = 691

 Score =  104 bits (259), Expect = 8e-21
 Identities = 71/145 (48%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
 Frame = +3

Query: 87  SPNLNRRSTRRN-------PSPELGXXXXXXXXXXXXXXXXXXPQSIQQQRQHFDDLHKS 245
           +PN  RRSTRR+       P+P+                     +      Q+   L  S
Sbjct: 46  NPNSTRRSTRRSAKVDEILPAPDWIEGVGDDDDERKEKKLKLLRRLSPNHTQNPGSLPNS 105

Query: 246 SSLNSVSGTSDSGDEGENPGESSKKRKINAVTDRSEDNIGTDQEEKVTIATDTLNGSPLE 425
            SL+SVS  S+S  + ENP  S KKRKINAV D S    G    EKV  ATDT  GS LE
Sbjct: 106 VSLHSVSYASNSNADVENPEASLKKRKINAVGDGS----GHTTAEKVAKATDTPQGSRLE 161

Query: 426 SGPTTPLPDKKLLVFILDRLQKKDT 500
           SGPTTPLPDKKLLVFILDRLQKKDT
Sbjct: 162 SGPTTPLPDKKLLVFILDRLQKKDT 186


>ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245230 [Vitis vinifera]
          Length = 750

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 61/154 (39%), Positives = 80/154 (51%), Gaps = 13/154 (8%)
 Frame = +3

Query: 78  SSSSPNLN-----------RRSTRRNPSPELGXXXXXXXXXXXXXXXXXXPQSIQQQRQ- 221
           S+S+PN N           RRSTRRNP+P+                     +  ++ +  
Sbjct: 42  SNSNPNPNLKSSTVSSTPVRRSTRRNPNPDPEEDENDTVAAAEDEEELSGRRREKKLKLV 101

Query: 222 -HFDDLHKSSSLNSVSGTSDSGDEGENPGESSKKRKINAVTDRSEDNIGTDQEEKVTIAT 398
                   S+SLNS S  SDS  E EN   S KKRKINA+ D S  ++ +++ EK     
Sbjct: 102 LRLPSQLNSASLNSASCGSDSNAEEENVPASHKKRKINAIGDGS-GHVDSEKAEKPISGA 160

Query: 399 DTLNGSPLESGPTTPLPDKKLLVFILDRLQKKDT 500
               G+ L+ GP TPLPDKKLLVF+LDRLQKKD+
Sbjct: 161 SNQQGTELDGGPATPLPDKKLLVFVLDRLQKKDS 194


>ref|NP_173490.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
           gi|8886949|gb|AAF80635.1|AC069251_28 F2D10.15
           [Arabidopsis thaliana] gi|209529785|gb|ACI49787.1|
           At1g20670 [Arabidopsis thaliana]
           gi|332191881|gb|AEE30002.1| DNA-binding
           bromodomain-containing protein [Arabidopsis thaliana]
          Length = 652

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
 Frame = +3

Query: 75  TSSSSPN-LNRRSTRRNPSPELGXXXXXXXXXXXXXXXXXXPQSIQQQRQHFDDLHKSSS 251
           + S +PN LN RS RRNP+   G                   +  +++ +    L+  S 
Sbjct: 59  SGSKNPNSLNHRSKRRNPNSNDGDSPWIKDEGEDNDDD----ERREKKHKLLHGLNSHSH 114

Query: 252 LNSVSGTSDSGDEGENPGESSKKRKINAVTDRSEDNIGTDQEEKVTIATDTLNGSPLESG 431
            +S +  SD   + + P  S  +R ++A    S+ + G    EK + ATD L GSP+ESG
Sbjct: 115 RHSPNSQSDLNLD-QTPEPSFNRRNLSAAASGSDYHTG----EKASKATDILQGSPVESG 169

Query: 432 PTTPLPDKKLLVFILDRLQKKDT 500
           PTTPLPDKKLL+FILDRLQKKDT
Sbjct: 170 PTTPLPDKKLLLFILDRLQKKDT 192


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