BLASTX nr result

ID: Panax21_contig00025249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025249
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g...    59   5e-07
ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [...    59   5e-07
ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [M...    58   7e-07
gb|ABN05856.1| KH, type 1 [Medicago truncatula]                        58   7e-07
ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 710

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +2

Query: 2   PGTTDRVVIISGNPDETQAAQSLLQAFILTGS 97
           PGT+DR+++ISG PDETQAAQSLLQAFIL+GS
Sbjct: 679 PGTSDRIIVISGTPDETQAAQSLLQAFILSGS 710


>ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 663

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +2

Query: 2   PGTTDRVVIISGNPDETQAAQSLLQAFILTGS 97
           PGT+DR+++ISG PDETQAAQSLLQAFIL+GS
Sbjct: 632 PGTSDRIIVISGTPDETQAAQSLLQAFILSGS 663


>ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
           gi|355482320|gb|AES63523.1| Heterogeneous nuclear
           ribonucleoprotein K [Medicago truncatula]
          Length = 766

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   PGTTDRVVIISGNPDETQAAQSLLQAFILTGSS 100
           PGT+DR +++SG+PDETQAAQSLLQAFIL GSS
Sbjct: 734 PGTSDRTIVLSGSPDETQAAQSLLQAFILNGSS 766


>gb|ABN05856.1| KH, type 1 [Medicago truncatula]
          Length = 564

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   PGTTDRVVIISGNPDETQAAQSLLQAFILTGSS 100
           PGT+DR +++SG+PDETQAAQSLLQAFIL GSS
Sbjct: 532 PGTSDRTIVLSGSPDETQAAQSLLQAFILNGSS 564


>ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|222866934|gb|EEF04065.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +2

Query: 5   GTTDRVVIISGNPDETQAAQSLLQAFILTGSS 100
           GT+DR+V+ISG PDETQAAQSLLQAFILTG S
Sbjct: 691 GTSDRIVVISGTPDETQAAQSLLQAFILTGQS 722


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