BLASTX nr result

ID: Panax21_contig00025239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025239
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001174030.1| Os04g0542100 [Oryza sativa Japonica Group] g...    46   4e-08
gb|EEC74923.1| hypothetical protein OsI_10871 [Oryza sativa Indi...    44   2e-07
ref|XP_003329237.1| hAT family dimerization domain-containing pr...    42   3e-07
dbj|BAD23067.1| hypothetical protein [Oryza sativa Japonica Group]     40   4e-07
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...    43   5e-07

>ref|NP_001174030.1| Os04g0542100 [Oryza sativa Japonica Group]
           gi|32492234|emb|CAE04268.1| OSJNBb0103I08.10 [Oryza
           sativa Japonica Group] gi|255675651|dbj|BAH92758.1|
           Os04g0542100 [Oryza sativa Japonica Group]
          Length = 349

 Score = 45.8 bits (107), Expect(2) = 4e-08
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = -1

Query: 492 DDNPLDFNILHWWKHYGPKFPILAKMARDILVIP 391
           +D+  DF++L WWK    KFP+LA MARD L IP
Sbjct: 269 EDDSEDFDVLAWWKKNSKKFPVLAIMARDFLAIP 302



 Score = 37.0 bits (84), Expect(2) = 4e-08
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 278 SSFSHAHRLITDIRASLNSATVETLMCVKDWLPEVEIAGE 159
           S+FS   R++ D R+SL    +E L+C KDWL   +  G+
Sbjct: 310 SAFSSGGRILGDTRSSLTPEMLEALVCAKDWLHRAKKQGD 349


>gb|EEC74923.1| hypothetical protein OsI_10871 [Oryza sativa Indica Group]
          Length = 230

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = -1

Query: 492 DDNPLDFNILHWWKHYGPKFPILAKMARDILVIP 391
           +++   F++L WWK +  KFP+L+ MARD L IP
Sbjct: 126 EEDSESFDVLDWWKRHAQKFPVLSSMARDFLAIP 159



 Score = 35.8 bits (81), Expect(2) = 2e-07
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
 Frame = -2

Query: 278 SSFSHAHRLITDIRASLNSATVETLMCVKDWL-----PEVEIAGESTIEV 144
           S+FS   R++ D R+SL    +E L+C KDWL     P + I G    EV
Sbjct: 167 SAFSCGGRILGDTRSSLTPEMLEALICAKDWLIKANDPLINIPGAEGGEV 216


>ref|XP_003329237.1| hAT family dimerization domain-containing protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
          Length = 655

 Score = 42.4 bits (98), Expect(2) = 3e-07
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = -2

Query: 278 SSFSHAHRLITDIRASLNSATVETLMCVKDWLPE 177
           S+FS + R++ D RASLN+ T+E L+C +DWL E
Sbjct: 613 SAFSASGRVLDDFRASLNADTLEALVCTQDWLKE 646



 Score = 37.4 bits (85), Expect(2) = 3e-07
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -1

Query: 474 FNILHWWKHYGPKFPILAKMARDILVIP 391
           F+IL WWK    +FP L+++AR +L+IP
Sbjct: 578 FDILEWWKFNSRQFPTLSQLARTVLMIP 605


>dbj|BAD23067.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 561

 Score = 40.0 bits (92), Expect(2) = 4e-07
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = -1

Query: 477 DFNILHWWKHYGPKFPILAKMARDILVIP 391
           DF+IL WW+    K+PIL++MA D+L +P
Sbjct: 303 DFDILQWWRVNSCKYPILSRMALDLLAVP 331



 Score = 39.3 bits (90), Expect(2) = 4e-07
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -2

Query: 278 SSFSHAHRLITDIRASLNSATVETLMCVKDWLPEVEIAGESTIEVGATIGDSEDHELNI 102
           S+FS   R+I+D R+ L S TVE L+C++DW+         +I      GD +    +I
Sbjct: 339 SAFSTGSRIISDYRSRLASGTVEALVCLQDWMRADGFGDPYSILTDTAEGDDDIKSFDI 397


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score = 43.1 bits (100), Expect(2) = 5e-07
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = -1

Query: 480 LDFNILHWWKHYGPKFPILAKMARDILVIP 391
           ++ N+L WWK    ++PILAK+ARD+L IP
Sbjct: 579 MEINVLEWWKVNSGRYPILAKIARDVLAIP 608



 Score = 35.8 bits (81), Expect(2) = 5e-07
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 278 SSFSHAHRLITDIRASLNSATVETLMCVKDWL 183
           S+FS + R++   R+SL   T+E L+C +DWL
Sbjct: 616 STFSTSERVLDPYRSSLTPTTIEALICTQDWL 647


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