BLASTX nr result

ID: Panax21_contig00025238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025238
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN26356.1| unknown [Zea mays]                                      80   1e-13
ref|NP_001147988.1| transposon protein [Zea mays] gi|195615000|g...    80   1e-13
ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [S...    79   3e-13
ref|XP_002463929.1| hypothetical protein SORBIDRAFT_01g009090 [S...    79   3e-13
ref|NP_001151544.1| transposon protein [Zea mays] gi|195647582|g...    79   3e-13

>gb|ACN26356.1| unknown [Zea mays]
          Length = 510

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
 Frame = -2

Query: 443 NLSKSKNNPS----GIFSFKKFVAKDCASNVMKKSELEEYLKETLHPLDDDNPLDFNILH 276
           N S ++ NPS    G+  F  +++ +  S    K +LE+YL+E+L P   +    F+IL+
Sbjct: 371 NASVNQGNPSSTGDGLLDFDMYLS-EIQSTQPAKCDLEQYLEESLTPRIQE----FDILN 425

Query: 275 WWKHYGPKFPTLAKMARDILVIP---XXXXXXXXXXXXXHRLITDIRASLNSATVETLMC 105
           WWK    KFPTL+KMARDIL IP                +R++ D R+SL   TVE L+C
Sbjct: 426 WWKLNTLKFPTLSKMARDILAIPMSMVSSGSSIFSAGTGNRMLDDYRSSLRPETVEALVC 485

Query: 104 VKDWL 90
            KDWL
Sbjct: 486 AKDWL 490


>ref|NP_001147988.1| transposon protein [Zea mays] gi|195615000|gb|ACG29330.1|
           transposon protein [Zea mays]
          Length = 768

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
 Frame = -2

Query: 443 NLSKSKNNPS----GIFSFKKFVAKDCASNVMKKSELEEYLKETLHPLDDDNPLDFNILH 276
           N S ++ NPS    G+  F  +++ +  S    K +LE+YL+E+L P   +    F+IL+
Sbjct: 629 NASVNQGNPSSTGDGLLDFDMYLS-EIQSTQPAKCDLEQYLEESLTPRIQE----FDILN 683

Query: 275 WWKHYGPKFPTLAKMARDILVIP---XXXXXXXXXXXXXHRLITDIRASLNSATVETLMC 105
           WWK    KFPTL+KMARDIL IP                +R++ D R+SL   TVE L+C
Sbjct: 684 WWKLNTLKFPTLSKMARDILAIPMSMVSSGSSIFSAGTGNRMLDDYRSSLRPETVEALVC 743

Query: 104 VKDWL 90
            KDWL
Sbjct: 744 AKDWL 748


>ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [Sorghum bicolor]
           gi|241931317|gb|EES04462.1| hypothetical protein
           SORBIDRAFT_04g002725 [Sorghum bicolor]
          Length = 604

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/88 (44%), Positives = 52/88 (59%)
 Frame = -2

Query: 353 SELEEYLKETLHPLDDDNPLDFNILHWWKHYGPKFPTLAKMARDILVIPXXXXXXXXXXX 174
           SE + YL++ L P DDD+   F+IL+WWK +  K+PTLA MARDIL +            
Sbjct: 519 SEYDRYLRDDLFPCDDDS---FDILNWWKMHASKYPTLAAMARDILAVTASTVPSESAFS 575

Query: 173 XXHRLITDIRASLNSATVETLMCVKDWL 90
              R+I D R  L  +TVE L+C +DWL
Sbjct: 576 TGGRIINDHRTRLAGSTVEALLCFQDWL 603


>ref|XP_002463929.1| hypothetical protein SORBIDRAFT_01g009090 [Sorghum bicolor]
           gi|241917783|gb|EER90927.1| hypothetical protein
           SORBIDRAFT_01g009090 [Sorghum bicolor]
          Length = 770

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
 Frame = -2

Query: 443 NLSKSKNNP----SGIFSFKKFVAKDCASNVMKKSELEEYLKETLHPLDDDNPLDFNILH 276
           N + ++ NP     G+  F  +++ +  S+   K ELE+YL+E+L P   +    F+IL+
Sbjct: 631 NTNVNQGNPPSTSDGLLDFDMYLS-EIQSSQPAKCELEQYLEESLTPRIQE----FDILN 685

Query: 275 WWKHYGPKFPTLAKMARDILVIP---XXXXXXXXXXXXXHRLITDIRASLNSATVETLMC 105
           WWK    KFPTL+KMARDIL IP                +R++ D R+SL   TVE L+C
Sbjct: 686 WWKLNTLKFPTLSKMARDILAIPMSMVSSGSSIFSAGTGNRMLDDYRSSLRPETVEALVC 745

Query: 104 VKDWL 90
            KDWL
Sbjct: 746 AKDWL 750


>ref|NP_001151544.1| transposon protein [Zea mays] gi|195647582|gb|ACG43259.1|
           transposon protein [Zea mays]
          Length = 764

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
 Frame = -2

Query: 443 NLSKSKNNP----SGIFSFKKFVAKDCASNVMKKSELEEYLKETLHPLDDDNPLDFNILH 276
           N + ++ NP     G+  F  +++ +  S+   K ELE+YL+E+L P   +    F+IL+
Sbjct: 625 NTNVNQGNPPPTSDGLLDFDMYLS-EIQSSQPAKCELEQYLEESLTPRIQE----FDILN 679

Query: 275 WWKHYGPKFPTLAKMARDILVIP---XXXXXXXXXXXXXHRLITDIRASLNSATVETLMC 105
           WWK    KFPTL+KMARDIL IP                +R++ D R+SL   TVE L+C
Sbjct: 680 WWKLNTLKFPTLSKMARDILAIPMSMVSSGSSIFSAGTGNRMLDDYRSSLRPETVEALVC 739

Query: 104 VKDWL 90
            KDWL
Sbjct: 740 AKDWL 744


Top