BLASTX nr result

ID: Panax21_contig00025224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025224
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|...   313   5e-83
ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi...   292   1e-76
ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71
gb|AFK33471.1| unknown [Lotus japonicus]                              240   6e-61
ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]    233   9e-59

>ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|302141888|emb|CBI19091.3|
            unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  313 bits (802), Expect = 5e-83
 Identities = 180/312 (57%), Positives = 215/312 (68%), Gaps = 1/312 (0%)
 Frame = -3

Query: 1052 MAVSLSNNIYFYTQNPALSTKPSKTTLQFTTLALHFKPPISGVLQIKSNFVSPVRNKRRS 873
            MA SLSN++ F       + KPSKT      LALH   P   +L  + +  SP+   RRS
Sbjct: 1    MAFSLSNHLLF-------TPKPSKT------LALHPPHPSKPILGFRLSTSSPIL--RRS 45

Query: 872  FKSLFTVDSSTPEINGQDETHPNDVEISESGADQES-STLKSLLKVYKEAILVGDEKTTS 696
            FK    +  STP  N ++E    DV+ S+S ADQ+  S LKSL+K YK+A+L GDEK  S
Sbjct: 46   FKPFLALQDSTPYTNNEEEGSRYDVKTSKSEADQKPLSVLKSLIKAYKDAVLDGDEKAVS 105

Query: 695  DVESVIFKVENEKNELVIKASTLSAEINSGKEKLIRLQADFDNFRKRSEKERLTIRSDAQ 516
            ++E++I  +E+EK EL  K S LSAEI SGKEK IRLQADFDNFRKRSEKERLT+R+DAQ
Sbjct: 106  EIEAMIDTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRTDAQ 165

Query: 515  GEVIQSLLPMVDNFERAXXXXXXXXXXXXKIDASYQGIYKQFVEIMRSLRVTVVATVGKP 336
            GEV++SLLPM+DNFERA            KID SYQGIYKQFVEIMRS  V  VATVGKP
Sbjct: 166  GEVVESLLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATVGKP 225

Query: 335  FDPSLHEAIAREESQEFKEGIIVQEXXXXXXXXXXXXRPAMVKVSSGPGKRKPSPATMEP 156
            FDP+LHEAIAREESQEFKEGII+QE            RPAMVKVS+GPG++K S    + 
Sbjct: 226  FDPALHEAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKTSAVADKS 285

Query: 155  TEQPATAAGVED 120
            T QPATAAGV++
Sbjct: 286  TGQPATAAGVDE 297


>ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi|223546931|gb|EEF48428.1|
            Protein grpE, putative [Ricinus communis]
          Length = 315

 Score =  292 bits (747), Expect = 1e-76
 Identities = 176/323 (54%), Positives = 210/323 (65%), Gaps = 12/323 (3%)
 Frame = -3

Query: 1052 MAVSLSNNIYFYTQ--NPALSTKPSKTT--------LQFTTLALHFK-PPISGVLQIKSN 906
            MAVS SN+        +P+ S KP KT         LQF    LH     IS    + +N
Sbjct: 1    MAVSFSNHSLLAPPRLSPSFSAKPPKTLETKSILLPLQFHHSKLHLSNSTISNSSPVTNN 60

Query: 905  FVSPVRNKRRSFKSLFTVDSSTPEINGQDETHPNDVEISESGADQES-STLKSLLKVYKE 729
             +     +RRSFK+    D S+P+ N ++ +  ND +  +   D +   +L  L+ +YKE
Sbjct: 61   HI-----ERRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHLPSLTKLINIYKE 115

Query: 728  AILVGDEKTTSDVESVIFKVENEKNELVIKASTLSAEINSGKEKLIRLQADFDNFRKRSE 549
            AIL+GDE+T +D+E+ I  +EN   ELV K S LS EI SGKEK IRLQADFDNFRKRSE
Sbjct: 116  AILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRKRSE 175

Query: 548  KERLTIRSDAQGEVIQSLLPMVDNFERAXXXXXXXXXXXXKIDASYQGIYKQFVEIMRSL 369
            KER TIRSDAQGEVI+SLLPMVD+FERA            KID SYQGIYKQFVEIMRSL
Sbjct: 176  KERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIMRSL 235

Query: 368  RVTVVATVGKPFDPSLHEAIAREESQEFKEGIIVQEXXXXXXXXXXXXRPAMVKVSSGPG 189
            +V VVATVGKPFDPSLHEAIAREESQE+KEGII+QE            RPAMVKVS+GPG
Sbjct: 236  QVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSAGPG 295

Query: 188  KRKPSPATMEPTEQPATAAGVED 120
            ++K         EQPATAAGV+D
Sbjct: 296  RKKAPVG----AEQPATAAGVDD 314


>ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|222842747|gb|EEE80294.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  275 bits (704), Expect = 1e-71
 Identities = 155/273 (56%), Positives = 190/273 (69%), Gaps = 1/273 (0%)
 Frame = -3

Query: 938 PISGVLQIKSNFVSPVRN-KRRSFKSLFTVDSSTPEINGQDETHPNDVEISESGADQESS 762
           PI+  L + S+   P+ N KRRS K+    + S P  NG++E +    EI E    +   
Sbjct: 8   PINASL-LSSSSPIPINNIKRRSLKTYLAPEDSAPTTNGKEENN----EIQEG--QKRGP 60

Query: 761 TLKSLLKVYKEAILVGDEKTTSDVESVIFKVENEKNELVIKASTLSAEINSGKEKLIRLQ 582
           +LK+L+K+Y++AI  GDEKT  D+E+    +E E +E + K S+LSAEI SGKEK IRLQ
Sbjct: 61  SLKNLMKIYRQAIFYGDEKTILDIEAKAATIEKENHEFLQKVSSLSAEITSGKEKYIRLQ 120

Query: 581 ADFDNFRKRSEKERLTIRSDAQGEVIQSLLPMVDNFERAXXXXXXXXXXXXKIDASYQGI 402
           ADFDNFRKRS+KER+ IRSDAQGEVI+SLLPMVD+FERA            KID+SYQGI
Sbjct: 121 ADFDNFRKRSDKERVNIRSDAQGEVIESLLPMVDSFERAKQQIQPETEKEKKIDSSYQGI 180

Query: 401 YKQFVEIMRSLRVTVVATVGKPFDPSLHEAIAREESQEFKEGIIVQEXXXXXXXXXXXXR 222
           YKQ V+IMR+L+V  V TVGKPFDPSLHEAIAREESQE+KEGII+QE            R
Sbjct: 181 YKQLVDIMRNLQVAAVPTVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLIGNRLIR 240

Query: 221 PAMVKVSSGPGKRKPSPATMEPTEQPATAAGVE 123
           PAMVKVSSGPG +K S  T    EQPATAAG++
Sbjct: 241 PAMVKVSSGPGNKKSSVGTETRAEQPATAAGMD 273


>gb|AFK33471.1| unknown [Lotus japonicus]
          Length = 313

 Score =  240 bits (612), Expect = 6e-61
 Identities = 140/277 (50%), Positives = 176/277 (63%), Gaps = 3/277 (1%)
 Frame = -3

Query: 941 PPISGVLQIKSNFVSPV--RNKRRSFKSLFTVDSSTPEINGQDETHPNDVEISESGADQE 768
           PP S  L     F +P+  RN+R  FKS      S      +     NDV ++    D++
Sbjct: 36  PPRSSNLATILGFPTPLSFRNQRTLFKSFVASHDSLSSTCDETGETQNDVRVANDDEDKK 95

Query: 767 S-STLKSLLKVYKEAILVGDEKTTSDVESVIFKVENEKNELVIKASTLSAEINSGKEKLI 591
              +L  L++ YK+AIL GDE T S +E  +  V NEKN+L  + STLSA   S KEK +
Sbjct: 96  PLPSLMVLIEAYKDAILSGDEVTVSQIEERLHLVANEKNKLAQELSTLSANQVSSKEKYL 155

Query: 590 RLQADFDNFRKRSEKERLTIRSDAQGEVIQSLLPMVDNFERAXXXXXXXXXXXXKIDASY 411
           RLQADFDNFRKR +KE+L I++DAQ E I+ LL MVDNFERA            KID SY
Sbjct: 156 RLQADFDNFRKRYDKEKLNIQADAQKEFIEKLLLMVDNFERAKQQIKAHTEKEKKIDVSY 215

Query: 410 QGIYKQFVEIMRSLRVTVVATVGKPFDPSLHEAIAREESQEFKEGIIVQEXXXXXXXXXX 231
           QGIY+QFVE++RS +V+VVATVGKPF+P LHEAIAREES EFKEGII++E          
Sbjct: 216 QGIYRQFVEVLRSHQVSVVATVGKPFNPLLHEAIAREESAEFKEGIIIKERRRGFLLKDQ 275

Query: 230 XXRPAMVKVSSGPGKRKPSPATMEPTEQPATAAGVED 120
             RPA VKVSSGPG +K   A  +  EQP+TAAG+++
Sbjct: 276 VLRPAQVKVSSGPGNKKSPVAPAKSMEQPSTAAGIDE 312


>ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  233 bits (593), Expect = 9e-59
 Identities = 128/253 (50%), Positives = 173/253 (68%)
 Frame = -3

Query: 878 RSFKSLFTVDSSTPEINGQDETHPNDVEISESGADQESSTLKSLLKVYKEAILVGDEKTT 699
           R F S  +  +S   +N +++   +   + + G   + S L++L++VY+EA L GD+KT 
Sbjct: 68  RPFASCLSAHNSVANVNNEED---DGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTV 124

Query: 698 SDVESVIFKVENEKNELVIKASTLSAEINSGKEKLIRLQADFDNFRKRSEKERLTIRSDA 519
           S+VE+ I  +  EK+EL  K   +S E+ SGKEK IRLQADFDNFRKRSEKE+ T++++A
Sbjct: 125 SEVEARIKIIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNA 184

Query: 518 QGEVIQSLLPMVDNFERAXXXXXXXXXXXXKIDASYQGIYKQFVEIMRSLRVTVVATVGK 339
           Q EV++SLLPM+D+F++A            KID SYQGIYKQFVE +RS RV+ VATVG+
Sbjct: 185 QKEVLESLLPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGR 244

Query: 338 PFDPSLHEAIAREESQEFKEGIIVQEXXXXXXXXXXXXRPAMVKVSSGPGKRKPSPATME 159
           PFDPSLHEA+AREESQE KEGII+QE            RPA VKVS GPG++  S  T++
Sbjct: 245 PFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRK--SSRTVD 302

Query: 158 PTEQPATAAGVED 120
             +QPA AA V++
Sbjct: 303 GEQQPAAAAVVDE 315


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