BLASTX nr result

ID: Panax21_contig00025219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025219
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protei...   194   1e-47
ref|XP_002527197.1| Thylakoid lumenal 16.5 kDa protein, chloropl...   191   2e-46
ref|XP_004139301.1| PREDICTED: thylakoid lumenal 16.5 kDa protei...   190   3e-46
ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago...   184   2e-44
gb|AFK39859.1| unknown [Medicago truncatula]                          182   4e-44

>ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic
           isoform 1 [Vitis vinifera] gi|297738978|emb|CBI28223.3|
           unnamed protein product [Vitis vinifera]
          Length = 234

 Score =  194 bits (494), Expect = 1e-47
 Identities = 107/189 (56%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
 Frame = +3

Query: 45  NQQRQILVSKALNESPISPPILSKRNXXXXXXXXXXXXXXGKGY-SDANAAILEADDDIE 221
           N +RQ+ +SKA++E   S PI++KR+              GKGY SDANAAILEADDD E
Sbjct: 42  NVKRQLTLSKAVSEPRPSSPIITKRSLSITLLTSLVFSLAGKGYYSDANAAILEADDDEE 101

Query: 222 LLEKVKKDRQKRLEKQSVISSSNKEKEYLQDLIYKLSKVGQAIENNNLPAAGSVLGQSSD 401
           LLEKVKKDR+KR+EKQ VISSSNKE  YLQ+L+YKLSKVGQAI+NN+L AA S LG ++D
Sbjct: 102 LLEKVKKDRKKRIEKQGVISSSNKETGYLQELVYKLSKVGQAIDNNDLSAASSFLGSNTD 161

Query: 402 TEWVRXXXXXXXXXXXXVEEKNEVNTFXXXXXXXXXXVVEKDIEASKIAFVASASAFGKW 581
            +WV+             EEK+EV+ F          VV  D+E+SKIAFV+SA+AF KW
Sbjct: 162 ADWVQKANIAFTKLSSSPEEKSEVDAFNSSLASLISSVVRNDMESSKIAFVSSATAFEKW 221

Query: 582 TTLTGLVGQ 608
           TTLTGLVG+
Sbjct: 222 TTLTGLVGR 230


>ref|XP_002527197.1| Thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223533462|gb|EEF35210.1| Thylakoid
           lumenal 16.5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 238

 Score =  191 bits (484), Expect = 2e-46
 Identities = 106/189 (56%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
 Frame = +3

Query: 45  NQQRQILVSKALNES-PISPPILSKRNXXXXXXXXXXXXXXGKGYSDANAAILEADDDIE 221
           N +R I++ KAL+ES P + PI+SKR+               +G S ANAAILEADDD E
Sbjct: 46  NAKRPIILCKALSESAPPTSPIISKRSLSVCFITSFVFSLTSRGNSSANAAILEADDDEE 105

Query: 222 LLEKVKKDRQKRLEKQSVISSSNKEKEYLQDLIYKLSKVGQAIENNNLPAAGSVLGQSSD 401
           LLEKVKKDR+KR+E+Q VISSSNKEK YLQD++YKLSKVGQAIENN+L  A SVLG ++D
Sbjct: 106 LLEKVKKDRKKRIERQGVISSSNKEKGYLQDVVYKLSKVGQAIENNDLTTANSVLGGTTD 165

Query: 402 TEWVRXXXXXXXXXXXXVEEKNEVNTFXXXXXXXXXXVVEKDIEASKIAFVASASAFGKW 581
           T+WV+              EKN+V+TF          VV  DIE+SK AFV+SA+AF  W
Sbjct: 166 TDWVQKANLAFDKLSSSPAEKNQVDTFNSSLASLISSVVRNDIESSKTAFVSSATAFETW 225

Query: 582 TTLTGLVGQ 608
           TTLTGLV Q
Sbjct: 226 TTLTGLVAQ 234


>ref|XP_004139301.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449493633|ref|XP_004159385.1|
           PREDICTED: thylakoid lumenal 16.5 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 238

 Score =  190 bits (482), Expect = 3e-46
 Identities = 101/188 (53%), Positives = 125/188 (66%)
 Frame = +3

Query: 45  NQQRQILVSKALNESPISPPILSKRNXXXXXXXXXXXXXXGKGYSDANAAILEADDDIEL 224
           N  +++++ K+ ++ P   P L+KR               G+G+SDANAAILEADDD EL
Sbjct: 47  NNTKRLVICKSSSDPPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEEL 106

Query: 225 LEKVKKDRQKRLEKQSVISSSNKEKEYLQDLIYKLSKVGQAIENNNLPAAGSVLGQSSDT 404
           LEKVKKDR+KRLEKQ VISS+NKEK YLQ+L+YKLSKVGQAI+NN+   A SVLG SSD 
Sbjct: 107 LEKVKKDRKKRLEKQGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDA 166

Query: 405 EWVRXXXXXXXXXXXXVEEKNEVNTFXXXXXXXXXXVVEKDIEASKIAFVASASAFGKWT 584
           +WV+             EEK+EV+ F          V + D+E+SK AFVASASAF KWT
Sbjct: 167 DWVKKANSAFNKLSSSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWT 226

Query: 585 TLTGLVGQ 608
            L GLVGQ
Sbjct: 227 ALAGLVGQ 234


>ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula]
           gi|355510412|gb|AES91554.1| Thylakoid lumenal 16.5 kDa
           protein [Medicago truncatula]
          Length = 223

 Score =  184 bits (467), Expect = 2e-44
 Identities = 101/188 (53%), Positives = 126/188 (67%)
 Frame = +3

Query: 45  NQQRQILVSKALNESPISPPILSKRNXXXXXXXXXXXXXXGKGYSDANAAILEADDDIEL 224
           N +RQ+   K +N+  +S   ++KR+              GKG  DANAAILEADDD+EL
Sbjct: 35  NLKRQLTPCKVVNQPSLS---VTKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDVEL 91

Query: 225 LEKVKKDRQKRLEKQSVISSSNKEKEYLQDLIYKLSKVGQAIENNNLPAAGSVLGQSSDT 404
           LEKVKKDR+KRLEKQ VISSS KE  YLQDL+YKLS+VGQAIE N+L +AGSVLG+  D 
Sbjct: 92  LEKVKKDRKKRLEKQGVISSSTKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDA 151

Query: 405 EWVRXXXXXXXXXXXXVEEKNEVNTFXXXXXXXXXXVVEKDIEASKIAFVASASAFGKWT 584
           +WV+             EEK+EV+TF          V + D+E+SKIAFV+SASA  KWT
Sbjct: 152 DWVQKANIALNKLSSSPEEKSEVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWT 211

Query: 585 TLTGLVGQ 608
           +LTGLVG+
Sbjct: 212 SLTGLVGK 219


>gb|AFK39859.1| unknown [Medicago truncatula]
          Length = 223

 Score =  182 bits (463), Expect = 4e-44
 Identities = 101/188 (53%), Positives = 125/188 (66%)
 Frame = +3

Query: 45  NQQRQILVSKALNESPISPPILSKRNXXXXXXXXXXXXXXGKGYSDANAAILEADDDIEL 224
           N +RQ+   K +N+  +S   ++KR+              GKG  DANAAILEADDD EL
Sbjct: 35  NLKRQLTPCKVVNQPSLS---VTKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDAEL 91

Query: 225 LEKVKKDRQKRLEKQSVISSSNKEKEYLQDLIYKLSKVGQAIENNNLPAAGSVLGQSSDT 404
           LEKVKKDR+KRLEKQ VISSS KE  YLQDL+YKLS+VGQAIE N+L +AGSVLG+  D 
Sbjct: 92  LEKVKKDRKKRLEKQGVISSSTKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDA 151

Query: 405 EWVRXXXXXXXXXXXXVEEKNEVNTFXXXXXXXXXXVVEKDIEASKIAFVASASAFGKWT 584
           +WV+             EEK+EV+TF          V + D+E+SKIAFV+SASA  KWT
Sbjct: 152 DWVQKANIALNKLSSSPEEKSEVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWT 211

Query: 585 TLTGLVGQ 608
           +LTGLVG+
Sbjct: 212 SLTGLVGK 219


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