BLASTX nr result

ID: Panax21_contig00025218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025218
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263685.2| PREDICTED: 50S ribosomal protein L25 [Vitis ...   293   3e-77
ref|XP_003635532.1| PREDICTED: 50S ribosomal protein L25-like [V...   293   4e-77
ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus...   286   4e-75
ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [C...   281   2e-73
ref|XP_002310742.1| predicted protein [Populus trichocarpa] gi|2...   280   3e-73

>ref|XP_002263685.2| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
           gi|302144151|emb|CBI23278.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  293 bits (751), Expect = 3e-77
 Identities = 151/245 (61%), Positives = 187/245 (76%), Gaps = 17/245 (6%)
 Frame = -2

Query: 930 MYKLWRAAAGDLRRVM-------VASRP----FHTIQAIPRELTGRKLAAKERAQGRIPA 784
           M + W AAAG LR  +       ++S P    +HTIQAI RE TG K++A++RAQGRIPA
Sbjct: 1   MSRWWGAAAGRLRTAVSNPRSLYLSSSPPAAAYHTIQAISREFTGSKVSARDRAQGRIPA 60

Query: 783 VVLAQ------NDNGKTLSRKHLITAEKEQIQSIVESVQLPFFCSTTFPLEIRXXXXXXX 622
           VV AQ      N NG+++SRK L+T E++QIQ+I++SV+  F CSTTFPL+IR       
Sbjct: 61  VVFAQQLLTGGNINGRSVSRKRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSV 120

Query: 621 XXXXGNVLPIKVHRDPETGKVLNLVFVWADKGTELQVDVPIVFKGEDICPGLSKGGYINK 442
               G VLP+K+HRD  TGKVLNLVF WAD+G+EL+VDVP+VFKGED+CPGL KGGY+N+
Sbjct: 121 LLESGTVLPLKIHRDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNR 180

Query: 441 IRTSLKYLCPSEHIPSKIEVDVSNLDIGDGVSMRDVQVHPSLKLLSKNETMPVCKIMATQ 262
           IR SLK+LCP+EHIPSKIEVDVSNLDIGD + M DV+VHPSLKLLSKNETMPVCKI+A +
Sbjct: 181 IRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILMHDVEVHPSLKLLSKNETMPVCKIVAAK 240

Query: 261 SDNFE 247
            +  E
Sbjct: 241 LERAE 245


>ref|XP_003635532.1| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
          Length = 251

 Score =  293 bits (750), Expect = 4e-77
 Identities = 151/245 (61%), Positives = 187/245 (76%), Gaps = 17/245 (6%)
 Frame = -2

Query: 930 MYKLWRAAAGDLRRVM-------VASRP----FHTIQAIPRELTGRKLAAKERAQGRIPA 784
           M + W AAAG LR  +       ++S P    +HTIQAI RE TG K++A++RAQGRIPA
Sbjct: 1   MSRWWGAAAGRLRTAVSNRRSLYLSSLPPAAAYHTIQAISREFTGSKVSARDRAQGRIPA 60

Query: 783 VVLAQ------NDNGKTLSRKHLITAEKEQIQSIVESVQLPFFCSTTFPLEIRXXXXXXX 622
           VV AQ      N NG+++SRK L+T E++QIQ+I++SV+  F CSTTFPL+IR       
Sbjct: 61  VVFAQQLLTGGNMNGRSVSRKRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSV 120

Query: 621 XXXXGNVLPIKVHRDPETGKVLNLVFVWADKGTELQVDVPIVFKGEDICPGLSKGGYINK 442
               G VLP+K+HRD  TGKVLNLVF WAD+G+EL+VDVP+VFKGED+CPGL KGGY+N+
Sbjct: 121 LLESGTVLPLKIHRDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNR 180

Query: 441 IRTSLKYLCPSEHIPSKIEVDVSNLDIGDGVSMRDVQVHPSLKLLSKNETMPVCKIMATQ 262
           IR SLK+LCP+EHIPSKIEVDVSNLDIGD + M DV+VHPSLKLLSKNETMPVCKI+A +
Sbjct: 181 IRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILMHDVEVHPSLKLLSKNETMPVCKIVAAK 240

Query: 261 SDNFE 247
            +  E
Sbjct: 241 LERAE 245


>ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis]
           gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25,
           putative [Ricinus communis]
          Length = 253

 Score =  286 bits (733), Expect = 4e-75
 Identities = 141/215 (65%), Positives = 174/215 (80%), Gaps = 5/215 (2%)
 Frame = -2

Query: 867 FHTIQAIPRELTGRKLAAKERAQGRIPAVVLAQ-----NDNGKTLSRKHLITAEKEQIQS 703
           +HTIQAIPRE TG ++AA++RAQGRIPAVV +Q     N N +++SRK L+T E++QIQS
Sbjct: 26  YHTIQAIPRECTGSRVAARDRAQGRIPAVVFSQSLLDKNPNSRSISRKQLLTTERKQIQS 85

Query: 702 IVESVQLPFFCSTTFPLEIRXXXXXXXXXXXGNVLPIKVHRDPETGKVLNLVFVWADKGT 523
           I+ SV+LPFFCSTTF L+IR           G +LPIKVHRD ETGK+LNLVFVWAD GT
Sbjct: 86  ILTSVELPFFCSTTFNLQIRAGSGSSVLIESGTILPIKVHRDEETGKILNLVFVWADDGT 145

Query: 522 ELQVDVPIVFKGEDICPGLSKGGYINKIRTSLKYLCPSEHIPSKIEVDVSNLDIGDGVSM 343
           EL+VDVP++FKGE+ CPGL KGG +N+IR SLK LCP+EHIP K+EVDVS+LDIGD VSM
Sbjct: 146 ELKVDVPLIFKGEEDCPGLKKGGKLNRIRKSLKVLCPAEHIPPKLEVDVSSLDIGDKVSM 205

Query: 342 RDVQVHPSLKLLSKNETMPVCKIMATQSDNFEPAT 238
            DV+VHPSLKLLSKNE +P+CKI++T  ++ EP T
Sbjct: 206 GDVEVHPSLKLLSKNENIPICKIVSTDLESPEPET 240


>ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
           gi|449515688|ref|XP_004164880.1| PREDICTED: 50S
           ribosomal protein L25-like [Cucumis sativus]
          Length = 258

 Score =  281 bits (718), Expect = 2e-73
 Identities = 146/248 (58%), Positives = 182/248 (73%), Gaps = 17/248 (6%)
 Frame = -2

Query: 930 MYKLWRAAAGDLRRVMVA-----SRPF-------HTIQAIPRELTGRKLAAKERAQGRIP 787
           M   WR+A  +LR    +     S PF       HTIQAIPRE +GRK+++K+RAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 786 AVVLAQ-----NDNGKTLSRKHLITAEKEQIQSIVESVQLPFFCSTTFPLEIRXXXXXXX 622
           AVV +Q     N    + SRKHL+T E++QI SI++SV+LPFFCST F L+IR       
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 621 XXXXGNVLPIKVHRDPETGKVLNLVFVWADKGTELQVDVPIVFKGEDICPGLSKGGYINK 442
               G++LPIK+HR+ ETGK+ N+VFVWAD+G+EL+VDVPIVFKGE+ CPGL KGG +NK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 441 IRTSLKYLCPSEHIPSKIEVDVSNLDIGDGVSMRDVQVHPSLKLLSKNETMPVCKIMATQ 262
           IRTSLKYLCP+EHIPSKIEVDVSNLDIGD + +RDV VH S+KLLSKNE MP+CKI+  +
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240

Query: 261 SDNFEPAT 238
           S+     T
Sbjct: 241 SETANTET 248


>ref|XP_002310742.1| predicted protein [Populus trichocarpa] gi|222853645|gb|EEE91192.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  280 bits (717), Expect = 3e-73
 Identities = 136/217 (62%), Positives = 172/217 (79%), Gaps = 5/217 (2%)
 Frame = -2

Query: 876 SRPFHTIQAIPRELTGRKLAAKERAQGRIPAVVLAQ-----NDNGKTLSRKHLITAEKEQ 712
           S  +HTIQAIPRE+ G +++A+ER QGRIPAVV +Q     N + +  SRK L+T EK+Q
Sbjct: 27  SSRYHTIQAIPREVVGSRVSAREREQGRIPAVVFSQSLLDINPSNRYTSRKRLLTTEKKQ 86

Query: 711 IQSIVESVQLPFFCSTTFPLEIRXXXXXXXXXXXGNVLPIKVHRDPETGKVLNLVFVWAD 532
           I +I++SV++PFFCSTTFPL+IR           G VLPIK+HRD +TGK+LNLVF WAD
Sbjct: 87  ILAILKSVEIPFFCSTTFPLQIRAGTGSSVLLESGTVLPIKIHRDEKTGKILNLVFAWAD 146

Query: 531 KGTELQVDVPIVFKGEDICPGLSKGGYINKIRTSLKYLCPSEHIPSKIEVDVSNLDIGDG 352
           +GTE++VDVP+VFKGE+ CPGL KGG++  +R++LKYLCP+EHIP KIEVD+SNLDI DG
Sbjct: 147 EGTEMKVDVPVVFKGEENCPGLKKGGHLKMMRSTLKYLCPAEHIPQKIEVDISNLDIEDG 206

Query: 351 VSMRDVQVHPSLKLLSKNETMPVCKIMATQSDNFEPA 241
           + MRD++VH SLKLLSKNE MPVCKI+AT  D  EPA
Sbjct: 207 LFMRDIEVHSSLKLLSKNENMPVCKIVATNLDTPEPA 243


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