BLASTX nr result

ID: Panax21_contig00025203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025203
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516004.1| Peroxisome assembly protein, putative [Ricin...   166   3e-39
ref|XP_002279072.1| PREDICTED: peroxisome biogenesis protein 2 [...   162   3e-38
ref|XP_002299722.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_002304212.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana]             161   7e-38

>ref|XP_002516004.1| Peroxisome assembly protein, putative [Ricinus communis]
           gi|223544909|gb|EEF46424.1| Peroxisome assembly protein,
           putative [Ricinus communis]
          Length = 347

 Score =  166 bits (419), Expect = 3e-39
 Identities = 86/113 (76%), Positives = 89/113 (78%)
 Frame = -3

Query: 341 EDDWVNAYQRXXXXXXXXXXXXXXXXXXXPIPIAISRVNQVDAGRLDIEMSAMLKEQLVK 162
           E +WV AYQ+                    IPI+ISRVNQ DA RLDIEMSAMLKEQLVK
Sbjct: 11  EHEWVRAYQKLLPQWQSLTLSHQSI-----IPISISRVNQFDAARLDIEMSAMLKEQLVK 65

Query: 161 VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAVE 3
           VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAVE
Sbjct: 66  VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAVE 118


>ref|XP_002279072.1| PREDICTED: peroxisome biogenesis protein 2 [Vitis vinifera]
           gi|297743241|emb|CBI36108.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  162 bits (411), Expect = 3e-38
 Identities = 83/113 (73%), Positives = 88/113 (77%)
 Frame = -3

Query: 341 EDDWVNAYQRXXXXXXXXXXXXXXXXXXXPIPIAISRVNQVDAGRLDIEMSAMLKEQLVK 162
           ED WV+ YQR                    IP++ISRVNQVDA RLDIE+SAMLKEQLVK
Sbjct: 18  EDAWVHTYQRLQPQWQSFSLSQQST-----IPVSISRVNQVDAARLDIEISAMLKEQLVK 72

Query: 161 VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAVE 3
           VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGN LMNLRYRDER +E
Sbjct: 73  VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNGLMNLRYRDERTME 125


>ref|XP_002299722.1| predicted protein [Populus trichocarpa] gi|222846980|gb|EEE84527.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  161 bits (408), Expect = 6e-38
 Identities = 82/113 (72%), Positives = 88/113 (77%)
 Frame = -3

Query: 341 EDDWVNAYQRXXXXXXXXXXXXXXXXXXXPIPIAISRVNQVDAGRLDIEMSAMLKEQLVK 162
           ED+W+  Y +                    IPI+ISRVNQ DA RLDIEMSAMLKEQLVK
Sbjct: 13  EDEWIRTYLKLLPEWQPPALSHQSM-----IPISISRVNQFDAARLDIEMSAMLKEQLVK 67

Query: 161 VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAVE 3
           VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERA++
Sbjct: 68  VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAMD 120


>ref|XP_002304212.1| predicted protein [Populus trichocarpa] gi|222841644|gb|EEE79191.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  161 bits (408), Expect = 6e-38
 Identities = 83/113 (73%), Positives = 89/113 (78%)
 Frame = -3

Query: 341 EDDWVNAYQRXXXXXXXXXXXXXXXXXXXPIPIAISRVNQVDAGRLDIEMSAMLKEQLVK 162
           ED+WV+ Y +                    IPI+ISRVNQ DA RLDIEMSAMLKEQLVK
Sbjct: 12  EDEWVHTYLKLLPQWKPLALSHQSM-----IPISISRVNQFDAARLDIEMSAMLKEQLVK 66

Query: 161 VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAVE 3
           VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALM+LRYRDERA+E
Sbjct: 67  VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMDLRYRDERAME 119


>gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana]
          Length = 389

 Score =  161 bits (407), Expect = 7e-38
 Identities = 81/112 (72%), Positives = 87/112 (77%)
 Frame = -3

Query: 341 EDDWVNAYQRXXXXXXXXXXXXXXXXXXXPIPIAISRVNQVDAGRLDIEMSAMLKEQLVK 162
           +D W+ +YQR                    IP+AISRVNQ DA RLD+EMSAMLKEQLVK
Sbjct: 8   DDAWIRSYQRLLPESQSLLASRRSV-----IPVAISRVNQFDAARLDVEMSAMLKEQLVK 62

Query: 161 VFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAV 6
           VF+LMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER V
Sbjct: 63  VFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGV 114


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