BLASTX nr result

ID: Panax21_contig00025199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025199
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266252.1| PREDICTED: putative oxidoreductase GLYR1 iso...   107   2e-38
ref|XP_002320548.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-35
gb|ABK22179.1| unknown [Picea sitchensis]                             101   4e-35
gb|ABK26501.1| unknown [Picea sitchensis]                             101   4e-35
ref|NP_001233832.1| succinic semialdehyde reductase isofom1 [Sol...   103   5e-35

>ref|XP_002266252.1| PREDICTED: putative oxidoreductase GLYR1 isoform 1 [Vitis vinifera]
           gi|147861759|emb|CAN78910.1| hypothetical protein
           VITISV_032948 [Vitis vinifera]
           gi|297736660|emb|CBI25677.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  107 bits (266), Expect(2) = 2e-38
 Identities = 54/58 (93%), Positives = 55/58 (94%)
 Frame = +3

Query: 6   ALSVVFDKDGVLEQMCSGKGYIDMSTVDADTSSKISEAITSKGGHFLEAPVSGSKKPA 179
           ALSVVFDKDGVLEQ+C GKGYIDMSTV ADTSSKISEAITSKGG FLEAPVSGSKKPA
Sbjct: 70  ALSVVFDKDGVLEQICHGKGYIDMSTVGADTSSKISEAITSKGGSFLEAPVSGSKKPA 127



 Score = 77.0 bits (188), Expect(2) = 2e-38
 Identities = 35/40 (87%), Positives = 40/40 (100%)
 Frame = +2

Query: 257 DGQLVILAAGEKSLYEEALPAFDVMGKKSFFLGQVGNGAR 376
           DGQLVILAAGEK+LY+EA+PAFD+MGKKSFFLGQVGNGA+
Sbjct: 129 DGQLVILAAGEKALYDEAIPAFDIMGKKSFFLGQVGNGAK 168


>ref|XP_002320548.1| predicted protein [Populus trichocarpa] gi|222861321|gb|EEE98863.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  102 bits (253), Expect(2) = 2e-35
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = +3

Query: 3   AALSVVFDKDGVLEQMCSGKGYIDMSTVDADTSSKISEAITSKGGHFLEAPVSGSKKPA 179
           AALSVVFDKDGVLEQ+ SGKGYIDMSTVD +TSSKIS+AITSKGG FLEAPVSGSK+PA
Sbjct: 69  AALSVVFDKDGVLEQIDSGKGYIDMSTVDPETSSKISQAITSKGGAFLEAPVSGSKQPA 127



 Score = 72.4 bits (176), Expect(2) = 2e-35
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = +2

Query: 260 GQLVILAAGEKSLYEEALPAFDVMGKKSFFLGQVGNGAR 376
           GQLVILAAG+K LYEE++PAFDV+GKKSFFLGQVGNGA+
Sbjct: 130 GQLVILAAGDKGLYEESIPAFDVLGKKSFFLGQVGNGAK 168


>gb|ABK22179.1| unknown [Picea sitchensis]
          Length = 293

 Score =  101 bits (251), Expect(2) = 4e-35
 Identities = 51/59 (86%), Positives = 53/59 (89%)
 Frame = +3

Query: 3   AALSVVFDKDGVLEQMCSGKGYIDMSTVDADTSSKISEAITSKGGHFLEAPVSGSKKPA 179
           AALSVVF KDGVLEQMC+GKGYIDMSTVD  TS+KISEAI  KGG FLEAPVSGSKKPA
Sbjct: 69  AALSVVFGKDGVLEQMCTGKGYIDMSTVDTVTSTKISEAIIEKGGRFLEAPVSGSKKPA 127



 Score = 72.0 bits (175), Expect(2) = 4e-35
 Identities = 31/40 (77%), Positives = 39/40 (97%)
 Frame = +2

Query: 257 DGQLVILAAGEKSLYEEALPAFDVMGKKSFFLGQVGNGAR 376
           DGQL+ILAAG+KSLY+E +P+FDVMGKK+FFLG+VGNGA+
Sbjct: 129 DGQLIILAAGDKSLYDEVMPSFDVMGKKAFFLGEVGNGAK 168


>gb|ABK26501.1| unknown [Picea sitchensis]
          Length = 180

 Score =  101 bits (251), Expect(2) = 4e-35
 Identities = 51/59 (86%), Positives = 53/59 (89%)
 Frame = +3

Query: 3   AALSVVFDKDGVLEQMCSGKGYIDMSTVDADTSSKISEAITSKGGHFLEAPVSGSKKPA 179
           AALSVVF KDGVLEQMC+GKGYIDMSTVD  TS+KISEAI  KGG FLEAPVSGSKKPA
Sbjct: 69  AALSVVFGKDGVLEQMCTGKGYIDMSTVDTVTSTKISEAIIEKGGRFLEAPVSGSKKPA 127



 Score = 72.0 bits (175), Expect(2) = 4e-35
 Identities = 31/40 (77%), Positives = 39/40 (97%)
 Frame = +2

Query: 257 DGQLVILAAGEKSLYEEALPAFDVMGKKSFFLGQVGNGAR 376
           DGQL+ILAAG+KSLY+E +P+FDVMGKK+FFLG+VGNGA+
Sbjct: 129 DGQLIILAAGDKSLYDEVMPSFDVMGKKAFFLGEVGNGAK 168


>ref|NP_001233832.1| succinic semialdehyde reductase isofom1 [Solanum lycopersicum]
           gi|171854589|dbj|BAG16485.1| succinic semialdehyde
           reductase isofom1 [Solanum lycopersicum]
          Length = 287

 Score =  103 bits (256), Expect(2) = 5e-35
 Identities = 51/59 (86%), Positives = 55/59 (93%)
 Frame = +3

Query: 3   AALSVVFDKDGVLEQMCSGKGYIDMSTVDADTSSKISEAITSKGGHFLEAPVSGSKKPA 179
           AALSVVFDK G LE +C+GKGYIDMSTVDADTSS+IS+AITSKGG FLEAPVSGSKKPA
Sbjct: 70  AALSVVFDKHGALEHICAGKGYIDMSTVDADTSSQISQAITSKGGSFLEAPVSGSKKPA 128



 Score = 69.7 bits (169), Expect(2) = 5e-35
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = +2

Query: 257 DGQLVILAAGEKSLYEEALPAFDVMGKKSFFLGQVGNGAR 376
           DGQLVILAAG+K LY++ +PAFDV+GKKSFFLG++GNGA+
Sbjct: 130 DGQLVILAAGDKDLYDQVVPAFDVLGKKSFFLGKIGNGAK 169


Top