BLASTX nr result

ID: Panax21_contig00025194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025194
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268838.2| PREDICTED: cyclin-T1-5-like isoform 1 [Vitis...   128   5e-28
emb|CAN74426.1| hypothetical protein VITISV_010983 [Vitis vinifera]   128   5e-28
ref|XP_002513390.1| Cyclin-L2, putative [Ricinus communis] gi|22...   109   3e-22
emb|CBI21689.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002306411.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19

>ref|XP_002268838.2| PREDICTED: cyclin-T1-5-like isoform 1 [Vitis vinifera]
          Length = 623

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/101 (58%), Positives = 74/101 (73%)
 Frame = +2

Query: 104 AAESEKIKWERKQNWSKPPNRPDHDYGHHVKQDDGDEDGHQGTKWQSASGQDFDNVEEGE 283
           A E+EK K ER+Q+W KP NRP+H+  HH K  D ++  HQG K  S+ G D +NVEEGE
Sbjct: 487 AVETEKTKRERRQSWPKPSNRPEHESSHHGKHQDDEDGHHQGLKPLSSRGSDLENVEEGE 546

Query: 284 VATFDDAGRGYRSPKSSNRKRKTGSPPEKPTEGKQWQDYIP 406
           V+ FDDA R +RSPKSS+RKRK GS PEK ++GKQ  DY+P
Sbjct: 547 VSAFDDADRAFRSPKSSSRKRKPGSSPEKLSDGKQRHDYMP 587


>emb|CAN74426.1| hypothetical protein VITISV_010983 [Vitis vinifera]
          Length = 361

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/101 (58%), Positives = 74/101 (73%)
 Frame = +2

Query: 104 AAESEKIKWERKQNWSKPPNRPDHDYGHHVKQDDGDEDGHQGTKWQSASGQDFDNVEEGE 283
           A E+EK K ER+Q+W KP NRP+H+  HH K  D ++  HQG K  S+ G D +NVEEGE
Sbjct: 225 AVETEKTKRERRQSWPKPSNRPEHESSHHGKHQDDEDGHHQGLKPLSSRGSDLENVEEGE 284

Query: 284 VATFDDAGRGYRSPKSSNRKRKTGSPPEKPTEGKQWQDYIP 406
           V+ FDDA R +RSPKSS+RKRK GS PEK ++GKQ  DY+P
Sbjct: 285 VSAFDDADRAFRSPKSSSRKRKPGSSPEKLSDGKQRHDYMP 325


>ref|XP_002513390.1| Cyclin-L2, putative [Ricinus communis] gi|223547298|gb|EEF48793.1|
           Cyclin-L2, putative [Ricinus communis]
          Length = 570

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
 Frame = +2

Query: 104 AAESEKIKWERKQNWSKPPNRPDHDYGHHVKQDDGDEDGH-QGTKWQSASGQDFDNVEEG 280
           AAESEKIK +R+Q+WSKP +R +H+  HH K  +   DG  QGTK   +   DF+N+EEG
Sbjct: 435 AAESEKIKRDRRQSWSKPLDRQEHENSHHEKHQEDVGDGERQGTKGHLSHKSDFNNMEEG 494

Query: 281 EVATFDDAGRGYRSPKSSNRKRKTGSPPEKPTEGKQWQDYIP 406
           EV   DD  +G+ SPKSSNRKRK+ SPPEK +EG+   DY P
Sbjct: 495 EVP--DDIDQGFHSPKSSNRKRKSRSPPEKISEGRHRNDYAP 534


>emb|CBI21689.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/80 (57%), Positives = 58/80 (72%)
 Frame = +2

Query: 167 PDHDYGHHVKQDDGDEDGHQGTKWQSASGQDFDNVEEGEVATFDDAGRGYRSPKSSNRKR 346
           P+H+  HH K  D ++  HQG K  S+ G D +NVEEGEV+ FDDA R +RSPKSS+RKR
Sbjct: 424 PEHESSHHGKHQDDEDGHHQGLKPLSSRGSDLENVEEGEVSAFDDADRAFRSPKSSSRKR 483

Query: 347 KTGSPPEKPTEGKQWQDYIP 406
           K GS PEK ++GKQ  DY+P
Sbjct: 484 KPGSSPEKLSDGKQRHDYMP 503


>ref|XP_002306411.1| predicted protein [Populus trichocarpa] gi|222855860|gb|EEE93407.1|
           predicted protein [Populus trichocarpa]
          Length = 612

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/101 (45%), Positives = 68/101 (67%)
 Frame = +2

Query: 104 AAESEKIKWERKQNWSKPPNRPDHDYGHHVKQDDGDEDGHQGTKWQSASGQDFDNVEEGE 283
           AAESEK K +R+Q+WSKP +R +++  HH K  D  ++ H G + Q +   D +N+E+GE
Sbjct: 476 AAESEKNKRDRRQSWSKPLDREEYESSHHGKNMDARDEQHHGMRGQLSQRPDRNNIEDGE 535

Query: 284 VATFDDAGRGYRSPKSSNRKRKTGSPPEKPTEGKQWQDYIP 406
           ++  DD  +G+ SPKSSNRKRK  SPP++ +EG+   D  P
Sbjct: 536 LSAPDDMYQGFPSPKSSNRKRKASSPPDRKSEGEHRTDNAP 576


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