BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025188
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    75   7e-12
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    73   2e-11
gb|ACN32036.1| unknown [Zea mays]                                      72   5e-11
gb|ACL54615.1| unknown [Zea mays]                                      72   5e-11
emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]              72   6e-11

>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/88 (42%), Positives = 47/88 (53%)
 Frame = +1

Query: 118 FRNPNISPRFSSARIQCQICGKNGHSALKCYSRFDHNYTXXXXXXXXXXXXXXTYDPTWY 297
           F     SP+ S  R  CQICG+ GH+ALKCY+RFD+NY               T    W+
Sbjct: 265 FSQHQSSPQVSGPRPVCQICGRTGHTALKCYNRFDNNYQAEIQAFSTLRVSDDT-GKEWH 323

Query: 298 PDSGATTHVTNDLENLSIHSDYPGNDQV 381
           PDS AT HVT+    L   ++Y G+D V
Sbjct: 324 PDSAATAHVTSSTNGLQSATEYEGDDAV 351


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/78 (41%), Positives = 46/78 (58%)
 Frame = +1

Query: 148 SSARIQCQICGKNGHSALKCYSRFDHNYTXXXXXXXXXXXXXXTYDPTWYPDSGATTHVT 327
           +S+R +CQ+C + GH+AL C+ RFD NY               +  P WY D+GAT H+T
Sbjct: 276 TSSRPRCQVCSRVGHTALNCWYRFDENYVPDQRSANSAAHQNGSNVP-WYTDTGATDHIT 334

Query: 328 NDLENLSIHSDYPGNDQV 381
            DL+ L++H  Y G DQ+
Sbjct: 335 GDLDRLTMHDKYTGTDQI 352


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = +1

Query: 148 SSARIQCQICGKNGHSALKCYSRFDHNY-TXXXXXXXXXXXXXXTYDPTWYPDSGATTHV 324
           SS+   CQICGK  H+AL+C+ RFD  Y                  DP WY DSGAT H+
Sbjct: 279 SSSSGTCQICGKGNHNALQCWHRFDQAYQAESTVKQAAAATHEYAVDPNWYMDSGATDHI 338

Query: 325 TNDLENLSIHSDYPGNDQVRM 387
           T+DLE L+    Y G D++++
Sbjct: 339 TSDLERLTTRERYTGGDKIQV 359


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = +1

Query: 148 SSARIQCQICGKNGHSALKCYSRFDHNY-TXXXXXXXXXXXXXXTYDPTWYPDSGATTHV 324
           SS+   CQICGK  H+AL+C+ RFD  Y                  DP WY DSGAT H+
Sbjct: 279 SSSSGTCQICGKGNHNALQCWHRFDQAYQAESTVKQAAAATHEYAVDPNWYMDSGATDHI 338

Query: 325 TNDLENLSIHSDYPGNDQVRM 387
           T+DLE L+    Y G D++++
Sbjct: 339 TSDLERLTTRERYTGGDKIQV 359


>emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]
          Length = 261

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = +1

Query: 157 RIQCQICGKNGHSALKCYSRFDHNYTXXXXXXXXXXXXXXTYDPTWYPDSGATTHVTNDL 336
           R +CQ+CGK GH+ +KCY RFD ++T                D  WY D+GAT HVT +L
Sbjct: 184 RPKCQLCGKLGHTVIKCYKRFDTSFTGEEKAANAATTSYGI-DTNWYVDTGATDHVTGEL 242

Query: 337 ENLSIHSDYPGNDQV 381
           + L++   Y GN+QV
Sbjct: 243 DKLTVRDKYTGNEQV 257