BLASTX nr result

ID: Panax21_contig00025177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025177
         (1680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635287.1| PREDICTED: U-box domain-containing protein 8...   496   e-138
ref|XP_004169145.1| PREDICTED: U-box domain-containing protein 8...   434   e-119
ref|XP_004134742.1| PREDICTED: U-box domain-containing protein 8...   434   e-119
ref|XP_002518593.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   423   e-116
ref|XP_002316696.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110

>ref|XP_003635287.1| PREDICTED: U-box domain-containing protein 8-like [Vitis vinifera]
            gi|359497783|ref|XP_003635641.1| PREDICTED: U-box
            domain-containing protein 8-like [Vitis vinifera]
            gi|147827038|emb|CAN62279.1| hypothetical protein
            VITISV_042771 [Vitis vinifera]
            gi|296084802|emb|CBI25940.3| unnamed protein product
            [Vitis vinifera]
          Length = 363

 Score =  496 bits (1277), Expect = e-138
 Identities = 254/362 (70%), Positives = 284/362 (78%)
 Frame = +2

Query: 41   MATQFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLSESPSLI 220
            MATQFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLD+GHRTCPITKLPLSE PSLI
Sbjct: 1    MATQFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDSGHRTCPITKLPLSEHPSLI 60

Query: 221  PNHALRSLISNYTLVSLPKPQPNPDPQALISTLTXXXXXXXXXXXXXDQLSRLSKRDLAL 400
            PNHALRSLISNYTLVS PKPQP+P+PQ LI+TLT             DQL++ SKR+ A 
Sbjct: 61   PNHALRSLISNYTLVSAPKPQPHPEPQTLIATLTSPSSPLHSKLHSLDQLNQFSKRNPAF 120

Query: 401  RHRLTESGAVSAVLTCVSSNDFSLREKAXXXXXXXXXXXXXKVGLVAEGAIGTIIAALRG 580
            R RLTESGAVSAVL CV S D SL+EKA             KVGLVAEGAIG I+AAL G
Sbjct: 121  RRRLTESGAVSAVLNCVGSEDSSLQEKALSLLLNLSLDDDNKVGLVAEGAIGRIVAALHG 180

Query: 581  GGGNCRXXXXXXXXXXXXXXXNKATIGAYPFAILALVSLLEDGNGRERKEAATALYTICS 760
               +CR               N+ATIG YP+AI ALVSLL DG GRE+KEAATALY ICS
Sbjct: 181  RSPDCRAVAATMLTSLAVVEVNRATIGTYPYAIRALVSLLRDGKGREKKEAATALYAICS 240

Query: 761  FPDNRRRAVECGAVPILLGAAVLGLERAIEVLGLLAKCKEGREEMGKFSDCIRILVNVMK 940
            FPDNRRRAVECGAVPIL+  A  GLERA+EVLGLLAKCKEGREEM KF+ C++ILV V++
Sbjct: 241  FPDNRRRAVECGAVPILIRIADSGLERAVEVLGLLAKCKEGREEMEKFNGCVKILVRVLR 300

Query: 941  DGSSRGVQYALLTMNSLCCYSELMCFEAIEEGVFEFCLGLLEDDNEKVRRNASSLIQLLR 1120
            +GSSRGVQYAL+T+NSLC   + MC E ++EGV E C+GL+EDDNEKVRRNASSL+Q L+
Sbjct: 301  NGSSRGVQYALMTLNSLCSNGDGMCLETMKEGVLEICMGLVEDDNEKVRRNASSLVQTLQ 360

Query: 1121 GK 1126
            GK
Sbjct: 361  GK 362


>ref|XP_004169145.1| PREDICTED: U-box domain-containing protein 8-like [Cucumis sativus]
          Length = 365

 Score =  434 bits (1116), Expect = e-119
 Identities = 226/362 (62%), Positives = 266/362 (73%), Gaps = 1/362 (0%)
 Frame = +2

Query: 41   MATQFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLSESPSLI 220
            MA  +PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPIT+LPL ++PSLI
Sbjct: 1    MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 221  PNHALRSLISNYTLVSLPKP-QPNPDPQALISTLTXXXXXXXXXXXXXDQLSRLSKRDLA 397
            PNHALRSLISN+  VSL KP  P+P PQ LIS L              +QL+R+SKRD A
Sbjct: 61   PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 398  LRHRLTESGAVSAVLTCVSSNDFSLREKAXXXXXXXXXXXXXKVGLVAEGAIGTIIAALR 577
            +R RLTESGAVSAVL CV S+D SL+EKA             KVGLVAEGAIG  +AAL+
Sbjct: 121  VRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180

Query: 578  GGGGNCRXXXXXXXXXXXXXXXNKATIGAYPFAILALVSLLEDGNGRERKEAATALYTIC 757
                +CR               NKATIGAYP+A+ +LV LL +GN RE+KEAATALY IC
Sbjct: 181  ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 758  SFPDNRRRAVECGAVPILLGAAVLGLERAIEVLGLLAKCKEGREEMGKFSDCIRILVNVM 937
            SFP NR R VECGAVPILL  A  GL+RA+EVLG+LAKCKEGREEM  F  C+ IL  V+
Sbjct: 241  SFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRVL 300

Query: 938  KDGSSRGVQYALLTMNSLCCYSELMCFEAIEEGVFEFCLGLLEDDNEKVRRNASSLIQLL 1117
            ++GS RGVQYALLT+ SLCC+ E +C EA  EG+   C+ L++DD+EK+R NA++LI +L
Sbjct: 301  RNGSPRGVQYALLTLASLCCHCERLCVEARREGILGICMTLIDDDSEKIRANAANLIHIL 360

Query: 1118 RG 1123
            +G
Sbjct: 361  KG 362


>ref|XP_004134742.1| PREDICTED: U-box domain-containing protein 8-like [Cucumis sativus]
          Length = 365

 Score =  434 bits (1116), Expect = e-119
 Identities = 226/362 (62%), Positives = 266/362 (73%), Gaps = 1/362 (0%)
 Frame = +2

Query: 41   MATQFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLSESPSLI 220
            MA  +PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPIT+LPL ++PSLI
Sbjct: 1    MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 221  PNHALRSLISNYTLVSLPKP-QPNPDPQALISTLTXXXXXXXXXXXXXDQLSRLSKRDLA 397
            PNHALRSLISN+  VSL KP  P+P PQ LIS L              +QL+R+SKRD A
Sbjct: 61   PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 398  LRHRLTESGAVSAVLTCVSSNDFSLREKAXXXXXXXXXXXXXKVGLVAEGAIGTIIAALR 577
            +R RLTESGAVSAVL CV S+D SL+EKA             KVGLVAEGAIG  +AAL+
Sbjct: 121  VRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180

Query: 578  GGGGNCRXXXXXXXXXXXXXXXNKATIGAYPFAILALVSLLEDGNGRERKEAATALYTIC 757
                +CR               NKATIGAYP+A+ +LV LL +GN RE+KEAATALY IC
Sbjct: 181  ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 758  SFPDNRRRAVECGAVPILLGAAVLGLERAIEVLGLLAKCKEGREEMGKFSDCIRILVNVM 937
            SFP NR R VECGAVPILL  A  GL+RA+EVLG+LAKCKEGREEM  F  C+ IL  V+
Sbjct: 241  SFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRVL 300

Query: 938  KDGSSRGVQYALLTMNSLCCYSELMCFEAIEEGVFEFCLGLLEDDNEKVRRNASSLIQLL 1117
            ++GS RGVQYALLT+ SLCC+ E +C EA  EG+   C+ L++DD+EK+R NA++LI +L
Sbjct: 301  RNGSPRGVQYALLTLASLCCHCERLCVEARREGILGICMTLIDDDSEKIRANAANLIHIL 360

Query: 1118 RG 1123
            +G
Sbjct: 361  KG 362


>ref|XP_002518593.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223542438|gb|EEF43980.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 374

 Score =  423 bits (1087), Expect = e-116
 Identities = 225/373 (60%), Positives = 265/373 (71%), Gaps = 8/373 (2%)
 Frame = +2

Query: 41   MATQFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLSESPSLI 220
            M T  P+DFKCPISLEIMSDPVILSSGHTFDRSSIQRWLD+GHRTCPITKLPL E P LI
Sbjct: 1    MGTHLPEDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDSGHRTCPITKLPLPEHPPLI 60

Query: 221  PNHALRSLISNYTLV--------SLPKPQPNPDPQALISTLTXXXXXXXXXXXXXDQLSR 376
            PNHALRSLISN+TL+        + P P  +P+ Q LISTLT              +L R
Sbjct: 61   PNHALRSLISNFTLLFSSKLQHPNTPPPPKSPNTQTLISTLTSPSSPLNSKLDSLSRLIR 120

Query: 377  LSKRDLALRHRLTESGAVSAVLTCVSSNDFSLREKAXXXXXXXXXXXXXKVGLVAEGAIG 556
            ++K D  LR +LTESGAVSAVL CV+S + +L+EKA             KVGLVAEGAI 
Sbjct: 121  ITKLDPFLRRQLTESGAVSAVLNCVNSPELALQEKALTLLLNLSLDDDNKVGLVAEGAIR 180

Query: 557  TIIAALRGGGGNCRXXXXXXXXXXXXXXXNKATIGAYPFAILALVSLLEDGNGRERKEAA 736
             ++A LR G  +CR               NKATIGAYP AI ALVS+L  G GRE KE+A
Sbjct: 181  RVVAILRSGSPDCRAIGCTILTSLAVVEVNKATIGAYPNAIQALVSILSCGKGREVKESA 240

Query: 737  TALYTICSFPDNRRRAVECGAVPILLGAAVLGLERAIEVLGLLAKCKEGREEMGKFSDCI 916
            TALY ICSF DNRRRAVE GAVPIL+    +GLERA+EVL +L KCKEGREEM + + C+
Sbjct: 241  TALYAICSFVDNRRRAVEFGAVPILVRICGMGLERAVEVLNVLVKCKEGREEMVRINGCV 300

Query: 917  RILVNVMKDGSSRGVQYALLTMNSLCCYSELMCFEAIEEGVFEFCLGLLEDDNEKVRRNA 1096
            ++LVNV+K+GSSRG+Q AL T+N LCCYS  +C EAI+EGV E C+ L+ED+NEK+ RNA
Sbjct: 301  KVLVNVIKNGSSRGLQCALFTLNCLCCYSLDICLEAIKEGVLEICVRLVEDENEKIMRNA 360

Query: 1097 SSLIQLLRGKRAV 1135
            SSL+Q L G R V
Sbjct: 361  SSLVQTLSGCRLV 373


>ref|XP_002316696.1| predicted protein [Populus trichocarpa] gi|222859761|gb|EEE97308.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  403 bits (1035), Expect = e-110
 Identities = 215/376 (57%), Positives = 256/376 (68%), Gaps = 14/376 (3%)
 Frame = +2

Query: 41   MATQFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLSESPSLI 220
            MAT  PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLD+GHRTCPITKLPL E P LI
Sbjct: 1    MATHLPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDSGHRTCPITKLPLPEHPCLI 60

Query: 221  PNHALRSLISNYTLVSLPKPQPNPDP--------------QALISTLTXXXXXXXXXXXX 358
            PNHALRSLIS++T+   PK QP+P+P              Q LI TL             
Sbjct: 61   PNHALRSLISSFTI---PKSQPDPNPCRNLNPDQSKKYQTQLLIYTLVSPSSTLESKLHS 117

Query: 359  XDQLSRLSKRDLALRHRLTESGAVSAVLTCVSSNDFSLREKAXXXXXXXXXXXXXKVGLV 538
              QL+RL+K D   R +LTESGAVSAVL CV+S +  ++EKA             KVGLV
Sbjct: 118  LSQLTRLTKLDSGPRRQLTESGAVSAVLNCVNSTESEIQEKALALLLNLSLDDDNKVGLV 177

Query: 539  AEGAIGTIIAALRGGGGNCRXXXXXXXXXXXXXXXNKATIGAYPFAILALVSLLEDGNGR 718
            AEG I  +I  +R G  + R               NKATIGAYP AI  L+ +L  G GR
Sbjct: 178  AEGVISRVINVIRAGSASSRAIGCTILTSLAVVEVNKATIGAYPNAIKTLIWVLYSGKGR 237

Query: 719  ERKEAATALYTICSFPDNRRRAVECGAVPILLGAAVLGLERAIEVLGLLAKCKEGREEMG 898
            E +EAATALY ICSF DNR+RAVECGAVP+L+    +GLERA+EVL LL KCKEGREEM 
Sbjct: 238  EVREAATALYAICSFVDNRKRAVECGAVPLLMKIGGMGLERAVEVLSLLVKCKEGREEMR 297

Query: 899  KFSDCIRILVNVMKDGSSRGVQYALLTMNSLCCYSELMCFEAIEEGVFEFCLGLLEDDNE 1078
            K + C+ +LV V+++GS RGVQ ALLT+  LCC++E M  EA +EGV E C+G L+D+NE
Sbjct: 298  KVNGCLEVLVKVIRNGSERGVQCALLTLTCLCCFAEEMRVEAEKEGVLEICVGFLDDENE 357

Query: 1079 KVRRNASSLIQLLRGK 1126
            K+RR+ASSL+Q L G+
Sbjct: 358  KIRRHASSLVQTLSGR 373


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