BLASTX nr result

ID: Panax21_contig00025156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025156
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280782.1| PREDICTED: transcription factor TGA1 [Vitis ...   130   9e-29
emb|CAN62273.1| hypothetical protein VITISV_012435 [Vitis vinifera]   130   9e-29
ref|XP_002534689.1| hypothetical protein RCOM_0376190 [Ricinus c...   123   1e-26
ref|XP_002532051.1| Transcription factor TGA1, putative [Ricinus...   121   7e-26
ref|XP_002310002.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_002280782.1| PREDICTED: transcription factor TGA1 [Vitis vinifera]
          Length = 362

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
 Frame = +3

Query: 120 MNSPSTHYISSRSMGIYEPIHQISMWAD-FKGNGCPNTSASMLIEVDTKLDNQSEDTSHE 296
           MNS STH+++SR MGIYEP+HQIS W + FK NGCPNTSAS + E++ KLDNQSEDTSH 
Sbjct: 1   MNSSSTHFVTSRRMGIYEPLHQISTWGESFKTNGCPNTSASTIAELEAKLDNQSEDTSHG 60

Query: 297 TLGHSSKFDQEANKPVDKVLRRLAQNR 377
           T G S K+DQEA KPVDKV RRLAQNR
Sbjct: 61  TPGPSDKYDQEATKPVDKVQRRLAQNR 87


>emb|CAN62273.1| hypothetical protein VITISV_012435 [Vitis vinifera]
          Length = 389

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
 Frame = +3

Query: 120 MNSPSTHYISSRSMGIYEPIHQISMWAD-FKGNGCPNTSASMLIEVDTKLDNQSEDTSHE 296
           MNS STH+++SR MGIYEP+HQIS W + FK NGCPNTSAS + E++ KLDNQSEDTSH 
Sbjct: 1   MNSSSTHFVTSRRMGIYEPLHQISTWGESFKTNGCPNTSASTIAELEAKLDNQSEDTSHG 60

Query: 297 TLGHSSKFDQEANKPVDKVLRRLAQNR 377
           T G S K+DQEA KPVDKV RRLAQNR
Sbjct: 61  TPGPSDKYDQEATKPVDKVQRRLAQNR 87


>ref|XP_002534689.1| hypothetical protein RCOM_0376190 [Ricinus communis]
           gi|223524764|gb|EEF27695.1| hypothetical protein
           RCOM_0376190 [Ricinus communis]
          Length = 168

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/99 (65%), Positives = 71/99 (71%), Gaps = 13/99 (13%)
 Frame = +3

Query: 120 MNSPSTHYISSRSMGIYEPIHQISMWAD-FKGNGCPNTSASM------------LIEVDT 260
           MNSPST ++SS  MGIYEPIHQI MW + FK NG PN S SM            +I VDT
Sbjct: 1   MNSPSTQFVSSGRMGIYEPIHQIGMWGEPFKSNGIPNASTSMFVAGDPNSSQSIIIAVDT 60

Query: 261 KLDNQSEDTSHETLGHSSKFDQEANKPVDKVLRRLAQNR 377
           KLDNQSEDTS  TLG SSK+DQEA KP+DKV RRLAQNR
Sbjct: 61  KLDNQSEDTSQNTLGPSSKYDQEATKPIDKVQRRLAQNR 99


>ref|XP_002532051.1| Transcription factor TGA1, putative [Ricinus communis]
           gi|223528294|gb|EEF30341.1| Transcription factor TGA1,
           putative [Ricinus communis]
          Length = 354

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/99 (64%), Positives = 70/99 (70%), Gaps = 13/99 (13%)
 Frame = +3

Query: 120 MNSPSTHYISSRSMGIYEPIHQISMWAD-FKGNGCPNTSASM------------LIEVDT 260
           MNSPST ++SS   GIYEPIHQI MW + FK NG PN S SM            +I VDT
Sbjct: 1   MNSPSTQFVSSGRTGIYEPIHQIGMWGEPFKSNGIPNASTSMFVAGDPNSSQSIIIAVDT 60

Query: 261 KLDNQSEDTSHETLGHSSKFDQEANKPVDKVLRRLAQNR 377
           KLDNQSEDTS  TLG SSK+DQEA KP+DKV RRLAQNR
Sbjct: 61  KLDNQSEDTSQNTLGPSSKYDQEATKPIDKVQRRLAQNR 99


>ref|XP_002310002.1| predicted protein [Populus trichocarpa] gi|222852905|gb|EEE90452.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/98 (62%), Positives = 71/98 (72%), Gaps = 12/98 (12%)
 Frame = +3

Query: 120 MNSPSTHYISSRSMGIYEPIHQISMWAD-FKGNGCPNTS-----------ASMLIEVDTK 263
           MNS ST +++   MGIY+P+HQI MW + FK NG PNTS           ASM+I  DTK
Sbjct: 1   MNSTSTQFVTPGRMGIYDPMHQIGMWGENFKSNGNPNTSTMFIAGNPNASASMIIAPDTK 60

Query: 264 LDNQSEDTSHETLGHSSKFDQEANKPVDKVLRRLAQNR 377
           LDNQSEDTS  TLGHS+K+DQEA+KP DKV RRLAQNR
Sbjct: 61  LDNQSEDTSQGTLGHSNKYDQEASKPADKVQRRLAQNR 98


Top