BLASTX nr result

ID: Panax21_contig00025146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025146
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312018.1| chorismate synthase [Populus trichocarpa] gi...   166   1e-39
gb|AAG50662.1|AC084242_6 chorismate synthase, putative [Arabidop...   166   2e-39
ref|NP_564534.1| chorismate synthase [Arabidopsis thaliana] gi|8...   166   2e-39
ref|XP_002894135.1| EMB1144 [Arabidopsis lyrata subsp. lyrata] g...   166   2e-39
gb|ABA54870.1| putative chorismate synthase [Fagus sylvatica]         164   7e-39

>ref|XP_002312018.1| chorismate synthase [Populus trichocarpa]
           gi|222851838|gb|EEE89385.1| chorismate synthase [Populus
           trichocarpa]
          Length = 438

 Score =  166 bits (421), Expect = 1e-39
 Identities = 85/119 (71%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   NDEFF-NEDGRIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTRDKQETEL 177
           NDEF+ +E GRIRTRTNRSGGIQGGISNGEIIN+RIAFKPTSTIGRKQ+TVTRDK+E EL
Sbjct: 317 NDEFYTDEHGRIRTRTNRSGGIQGGISNGEIINLRIAFKPTSTIGRKQHTVTRDKKEIEL 376

Query: 178 IARGRHDPCVVPRAVPMVESMXXXXXXXXXXXXXXXXXXFPINKDLQEPLQLPEFESAS 354
           IARGRHDPCVVPRAVPMVE+M                  FPIN DLQEPL +P  E+A+
Sbjct: 377 IARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQFSQSYLFPINPDLQEPLTMPRLEAAN 435


>gb|AAG50662.1|AC084242_6 chorismate synthase, putative [Arabidopsis thaliana]
          Length = 435

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/119 (70%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   NDEFF-NEDGRIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTRDKQETEL 177
           NDEF+ +E+GRIRTRTNRSGGIQGGISNGEIINMR+AFKPTSTIGRKQNTVTRDK ETE+
Sbjct: 315 NDEFYTDENGRIRTRTNRSGGIQGGISNGEIINMRVAFKPTSTIGRKQNTVTRDKVETEM 374

Query: 178 IARGRHDPCVVPRAVPMVESMXXXXXXXXXXXXXXXXXXFPINKDLQEPLQLPEFESAS 354
           IARGRHDPCVVPRAVPMVE+M                  FPIN +LQEPLQ+ + ++A+
Sbjct: 375 IARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCHLFPINPELQEPLQIEQPQNAT 433


>ref|NP_564534.1| chorismate synthase [Arabidopsis thaliana]
           gi|83300489|sp|P57720.2|AROC_ARATH RecName:
           Full=Chorismate synthase, chloroplastic; AltName:
           Full=5-enolpyruvylshikimate-3-phosphate phospholyase;
           AltName: Full=Protein EMBRYO DEFECTIVE 1144; Flags:
           Precursor gi|15982824|gb|AAL09759.1| At1g48850/T24P22_3
           [Arabidopsis thaliana] gi|53749180|gb|AAU90075.1|
           At1g48850 [Arabidopsis thaliana]
           gi|110742465|dbj|BAE99151.1| hypothetical protein
           [Arabidopsis thaliana] gi|332194235|gb|AEE32356.1|
           chorismate synthase [Arabidopsis thaliana]
          Length = 436

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/119 (70%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   NDEFF-NEDGRIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTRDKQETEL 177
           NDEF+ +E+GRIRTRTNRSGGIQGGISNGEIINMR+AFKPTSTIGRKQNTVTRDK ETE+
Sbjct: 316 NDEFYTDENGRIRTRTNRSGGIQGGISNGEIINMRVAFKPTSTIGRKQNTVTRDKVETEM 375

Query: 178 IARGRHDPCVVPRAVPMVESMXXXXXXXXXXXXXXXXXXFPINKDLQEPLQLPEFESAS 354
           IARGRHDPCVVPRAVPMVE+M                  FPIN +LQEPLQ+ + ++A+
Sbjct: 376 IARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCHLFPINPELQEPLQIEQPQNAT 434


>ref|XP_002894135.1| EMB1144 [Arabidopsis lyrata subsp. lyrata]
           gi|297339977|gb|EFH70394.1| EMB1144 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 435

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/119 (70%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   NDEFF-NEDGRIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTRDKQETEL 177
           NDEF+ +E+GRIRTRTNRSGGIQGGISNGEIINMR+AFKPTSTIGRKQNTVTRDK ETE+
Sbjct: 315 NDEFYTDENGRIRTRTNRSGGIQGGISNGEIINMRVAFKPTSTIGRKQNTVTRDKVETEM 374

Query: 178 IARGRHDPCVVPRAVPMVESMXXXXXXXXXXXXXXXXXXFPINKDLQEPLQLPEFESAS 354
           IARGRHDPCVVPRAVPMVE+M                  FPIN +LQEPLQ+ + ++A+
Sbjct: 375 IARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCHLFPINPELQEPLQIEQPQNAT 433


>gb|ABA54870.1| putative chorismate synthase [Fagus sylvatica]
          Length = 434

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/118 (70%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   NDEFF-NEDGRIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTRDKQETEL 177
           NDEFF +E+GRIRTRTNRSGGIQGGISNGE+INMR+AFKPT+TI RKQ TVTR+K+E EL
Sbjct: 313 NDEFFTDENGRIRTRTNRSGGIQGGISNGEVINMRVAFKPTATISRKQQTVTREKKEIEL 372

Query: 178 IARGRHDPCVVPRAVPMVESMXXXXXXXXXXXXXXXXXXFPINKDLQEPLQLPEFESA 351
           IARGRHDPCVVPRAVPMVE+M                  FPIN DLQEP  LP FE A
Sbjct: 373 IARGRHDPCVVPRAVPMVEAMVALVLADQLMSQYAQCNLFPINPDLQEPFSLPRFEPA 430


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