BLASTX nr result
ID: Panax21_contig00025135
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00025135 (837 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin... 97 6e-28 ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin... 86 1e-26 ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g... 91 1e-26 ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ... 89 4e-24 ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g... 87 1e-23 >ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max] Length = 311 Score = 97.1 bits (240), Expect(3) = 6e-28 Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%) Frame = -3 Query: 610 YRSSQLRRLHVAFLYDSKSESRCEVFKKLPLLEELILVSTDISKEAIAYAGQC-PMLRSY 434 + +S LR L +A Y E CE+ +KLP LEEL + ++++K+ + GQC P L++ Sbjct: 106 HSTSNLRSLRLACCYQISDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTL 165 Query: 433 KFVKTGWGRDHVFTEIMYFDEEAIAIAKNMTQLRHLQLIGNNMTNKGLQAILDGCP 266 KF G+ R H+ DEEA AIA+ M L HLQL GN +TN+GL AILDGCP Sbjct: 166 KFNMEGYRRPHIEC-----DEEAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCP 216 Score = 48.1 bits (113), Expect(3) = 6e-28 Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%) Frame = -2 Query: 206 GKRCSEQIKDLKIPENSTED------CDYNIMSPDYDDYDYEGLSDYDYEGPSDYDFY 51 GKRC+EQIK+L++P + T+D DY + DY G+SD D+ DYD+Y Sbjct: 236 GKRCAEQIKELRLPCDPTDDYPFEAEIDYGSLDEDYP----SGISDIDFLSDDDYDYY 289 Score = 25.8 bits (55), Expect(3) = 6e-28 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -1 Query: 267 PHLVSLDLGRCFNLNL 220 P L SLDL +CFN+NL Sbjct: 216 PLLESLDLRQCFNVNL 231 >ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max] Length = 318 Score = 86.3 bits (212), Expect(3) = 1e-26 Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 3/118 (2%) Frame = -3 Query: 610 YRSSQLRRLHVAFLYDSKSESRCEVFKKLPLLEEL--ILVSTDISKEAIAYAGQCPM-LR 440 + +S LR L +A Y E CE+ K+LP LEEL + S + +++ + G+C L+ Sbjct: 112 HSTSNLRSLRLACCYQISDEGLCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLK 171 Query: 439 SYKFVKTGWGRDHVFTEIMYFDEEAIAIAKNMTQLRHLQLIGNNMTNKGLQAILDGCP 266 + KF G+ R H+ DEEA AIA+ M L HLQL GN +TN+GL AILDGCP Sbjct: 172 TLKFNMKGYRRPHIEC-----DEEAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCP 224 Score = 50.4 bits (119), Expect(3) = 1e-26 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = -2 Query: 206 GKRCSEQIKDLKIPENSTEDCDYNIMSPDYD--DYDYEGLSDYDYEGPSDYDFY 51 GKRC+EQIK+L++P + T+DC + DY D D +SD D+ DYD+Y Sbjct: 244 GKRCAEQIKELRLPCDPTDDCPFE-ADVDYGSLDEDSSAISDIDFLSDDDYDYY 296 Score = 30.0 bits (66), Expect(3) = 1e-26 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 267 PHLVSLDLGRCFNLNL 220 PHL SLDL +CFN+NL Sbjct: 224 PHLESLDLRQCFNVNL 239 >ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] gi|355482931|gb|AES64134.1| F-box protein SKIP19 [Medicago truncatula] Length = 325 Score = 90.5 bits (223), Expect(3) = 1e-26 Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 5/118 (4%) Frame = -3 Query: 604 SSQLRRLHVAFLYDSKSESRCEVFKKLPLLEELILVSTDISKEAIAYAGQ-CPMLRSYKF 428 +S L+RL +A + E C+ +K P LEEL + +++S G+ CP L++ KF Sbjct: 118 ASHLQRLRLASCWSISDEGLCDAAEKFPCLEELDISISNLSDRLFEPIGRRCPRLKTLKF 177 Query: 427 VKTGWGRDHVF----TEIMYFDEEAIAIAKNMTQLRHLQLIGNNMTNKGLQAILDGCP 266 G+ H+ E Y D EA AIAK M LRHLQLIGN MTN GL A+LDGCP Sbjct: 178 NSQGYRHPHIQYDDDDEDAYDDNEAFAIAKYMPGLRHLQLIGNEMTNDGLVALLDGCP 235 Score = 45.1 bits (105), Expect(3) = 1e-26 Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 8/58 (13%) Frame = -2 Query: 206 GKRCSEQIKDLKIPENSTED-------CDYNIMSPDYDDYDYEGL-SDYDYEGPSDYD 57 GKRC EQIK ++P ++T+D CDY SP DD D L SDYDY+ DYD Sbjct: 255 GKRCKEQIKYFRLPHDATDDYPFQTSECDYG--SPVEDDADESDLMSDYDYD-YEDYD 309 Score = 30.8 bits (68), Expect(3) = 1e-26 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 267 PHLVSLDLGRCFNLNL 220 PHL SLD+ RCFN+NL Sbjct: 235 PHLESLDIRRCFNVNL 250 >ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 305 Score = 88.6 bits (218), Expect(3) = 4e-24 Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Frame = -3 Query: 607 RSSQLRRLHVAFLYDSKSESRCEVFKKLPLLEELILVSTDISKEAIAYAG-QCPMLRSYK 431 RSS L+RL + Y + + KK PLLEEL + +S EA+ G CP+LRS K Sbjct: 113 RSSHLKRLRLLSSYTLSDAAFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLK 172 Query: 430 FVKTGWGRDHVFTEIMYFDEEAIAIAKNMTQLRHLQLIGNNMTNKGLQAILDGCP 266 G+ R H+ + +EEA+AI + M LR+LQ+ GN +TN G+QAILDGCP Sbjct: 173 LNCQGYKRPHIES-----NEEALAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCP 222 Score = 43.1 bits (100), Expect(3) = 4e-24 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = -2 Query: 206 GKRCSEQIKDLKIPENSTEDCDYNIMSPDY--DDYDY-EGLSDYDYEGPSDYDFY 51 G C E+IKDL+ P++ T+D +N PDY + DY G SD ++ D D+Y Sbjct: 242 GMLCGERIKDLRRPDDPTDDYPFNPEIPDYGSSEEDYPSGFSDMEFATDDDDDYY 296 Score = 26.6 bits (57), Expect(3) = 4e-24 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -1 Query: 267 PHLVSLDLGRCFNLNLD 217 PHL LDL +CFN++L+ Sbjct: 222 PHLEFLDLRQCFNVHLE 238 >ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] gi|355482930|gb|AES64133.1| F-box protein SKIP19 [Medicago truncatula] Length = 332 Score = 86.7 bits (213), Expect(3) = 1e-23 Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 1/114 (0%) Frame = -3 Query: 604 SSQLRRLHVAFLYDSKSESRCEVFKKLPLLEELILVSTDISKEAIAYAGQC-PMLRSYKF 428 ++ L+RL + Y+ E CEV KL LEEL + +S + + G+C P L+++KF Sbjct: 120 ANHLQRLRLLGCYNVTDEGLCEVAGKLSHLEELDITIHSLSNDPLEAIGRCCPQLKTFKF 179 Query: 427 VKTGWGRDHVFTEIMYFDEEAIAIAKNMTQLRHLQLIGNNMTNKGLQAILDGCP 266 G+ R M FD+EA +IAK M LRHL L+GN M+ GL+AILDGCP Sbjct: 180 NIEGFRRPR-----MEFDDEAFSIAKTMPGLRHLMLVGNKMSKDGLRAILDGCP 228 Score = 41.6 bits (96), Expect(3) = 1e-23 Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 10/61 (16%) Frame = -2 Query: 206 GKRCSEQIKDLKIPENSTED------CDYNIMSPDYD---DYDY-EGLSDYDYEGPSDYD 57 GKRC EQIK L++P ++T+D Y S D D D DY G+SD D +DYD Sbjct: 248 GKRCREQIKYLRLPYDATDDYPFRVELHYGYGSHDEDEDEDEDYPSGISDIDLLSDNDYD 307 Query: 56 F 54 + Sbjct: 308 Y 308 Score = 28.5 bits (62), Expect(3) = 1e-23 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = -1 Query: 267 PHLVSLDLGRCFNLNL 220 PHL SLD+ +CFNL+L Sbjct: 228 PHLESLDIRQCFNLSL 243