BLASTX nr result

ID: Panax21_contig00025126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025126
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248...    78   1e-12
emb|CBI22898.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248563 [Vitis vinifera]
          Length = 1766

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
 Frame = +3

Query: 33   SKTNEETSADLIDSELSEKHNSNNFRDNEERQIAEDHIETSAGYNSAKTGWGEVRTRTSK 212
            S+  E +S    D E S+ HN ++F      +  EDH++TSAGY   K  WGEV+ R+SK
Sbjct: 1036 SEDPESSSMHAADLEQSQNHNRDDFIHKPRSEETEDHLDTSAGYKDNKIRWGEVKARSSK 1095

Query: 213  RMMAEDHIPMDSCVGYHDTHDGQFRGKRDADDETIFFNECEGSSGVKINGCFKDCSESDL 392
            R  + D +  D+C G+  + D      +D + +T   N C  SS  +I     +  E  L
Sbjct: 1096 RFRSGDFVASDACTGFDVSFDVHNGNGKDINGQTKPENGCGNSSPSEIQNHAGELLEK-L 1154

Query: 393  SRGYE-LGVGTSHSPELKENPTPKP 464
             R  E  G G  +  ++K N    P
Sbjct: 1155 GRDVEPFGTGLENKDDVKNNELAPP 1179


>emb|CBI22898.3| unnamed protein product [Vitis vinifera]
          Length = 1569

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
 Frame = +3

Query: 48   ETSADLIDSELSEKHNSNNFRDNEERQIAEDHIETSAGYNSAKTGWGEVRTRTSKRMMAE 227
            E  ADL+ S       ++     E+    EDH++   GY   K  WG V+ RTSKR+   
Sbjct: 1000 ENQADLVGSSSKAPQEASERGQPEK---IEDHLDLFEGYKDGKIRWGGVKARTSKRLRVV 1056

Query: 228  DHIPMDS------CVGYHDTHDGQFRGKRDADDETIFFNECEGSSGVKI-NGCFKDCSES 386
            + +P D+      C+  HD  +    G ++ +     ++     S +K  +  F +C   
Sbjct: 1057 EPMPSDTDARSRQCIDGHDATENTINGFQEPEKN---YDRISPHSEIKYHHSSFNECMNY 1113

Query: 387  D-------------LSRGYELGVGTSHSPELKENPTPKPIKLRIKSK 488
            D              +   +   GT H P LKE+ T    KLRI+SK
Sbjct: 1114 DEPPKQVNMVAGDTAASSVQHSNGTDHPPHLKESST-SSTKLRIRSK 1159


Top