BLASTX nr result

ID: Panax21_contig00025107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025107
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like...   139   2e-53
emb|CBI17911.3| unnamed protein product [Vitis vinifera]              139   2e-53
ref|XP_002518315.1| APO protein 3, mitochondrial precursor, puta...   129   5e-48
ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like...   129   1e-44
ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein ...   119   2e-43

>ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
          Length = 481

 Score =  139 bits (351), Expect(2) = 2e-53
 Identities = 62/77 (80%), Positives = 68/77 (88%)
 Frame = -2

Query: 692 SDKCSGFAVRGMEAWEKMQSGPIKLVQKYAVQTCGYCSEVQVGSKGHRVRQCQAFKHQMR 513
           +D   GFA++GMEAWEKM  G  KL+QKYAVQTCGYCSEVQVG KGHRVR CQA+KHQMR
Sbjct: 341 ADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQMR 400

Query: 512 DGQHAWQEATIDDLIPP 462
           DGQHAWQEAT+DDLIPP
Sbjct: 401 DGQHAWQEATVDDLIPP 417



 Score = 96.3 bits (238), Expect(2) = 2e-53
 Identities = 47/65 (72%), Positives = 54/65 (83%)
 Frame = -3

Query: 463 PVYVWHVQDPQGGGLLVHGFKRYYGKLPAVVEMVAQAGARVG*NYSDVMREDVAVPRLDE 284
           PV+VWHV+D Q GG LV+G +RYYGKLPAVVE+ AQAGA VG NY  +MREDVAVP LDE
Sbjct: 417 PVHVWHVRDVQDGGPLVNGLQRYYGKLPAVVELFAQAGANVGENYVAMMREDVAVPGLDE 476

Query: 283 ERLVV 269
           E+ VV
Sbjct: 477 EKWVV 481


>emb|CBI17911.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  139 bits (351), Expect(2) = 2e-53
 Identities = 62/77 (80%), Positives = 68/77 (88%)
 Frame = -2

Query: 692 SDKCSGFAVRGMEAWEKMQSGPIKLVQKYAVQTCGYCSEVQVGSKGHRVRQCQAFKHQMR 513
           +D   GFA++GMEAWEKM  G  KL+QKYAVQTCGYCSEVQVG KGHRVR CQA+KHQMR
Sbjct: 314 ADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQMR 373

Query: 512 DGQHAWQEATIDDLIPP 462
           DGQHAWQEAT+DDLIPP
Sbjct: 374 DGQHAWQEATVDDLIPP 390



 Score = 96.3 bits (238), Expect(2) = 2e-53
 Identities = 47/65 (72%), Positives = 54/65 (83%)
 Frame = -3

Query: 463 PVYVWHVQDPQGGGLLVHGFKRYYGKLPAVVEMVAQAGARVG*NYSDVMREDVAVPRLDE 284
           PV+VWHV+D Q GG LV+G +RYYGKLPAVVE+ AQAGA VG NY  +MREDVAVP LDE
Sbjct: 390 PVHVWHVRDVQDGGPLVNGLQRYYGKLPAVVELFAQAGANVGENYVAMMREDVAVPGLDE 449

Query: 283 ERLVV 269
           E+ VV
Sbjct: 450 EKWVV 454


>ref|XP_002518315.1| APO protein 3, mitochondrial precursor, putative [Ricinus communis]
           gi|223542535|gb|EEF44075.1| APO protein 3, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 390

 Score =  129 bits (325), Expect(2) = 5e-48
 Identities = 54/77 (70%), Positives = 67/77 (87%)
 Frame = -2

Query: 692 SDKCSGFAVRGMEAWEKMQSGPIKLVQKYAVQTCGYCSEVQVGSKGHRVRQCQAFKHQMR 513
           SD   G A+RGMEAW+K+Q+G  +L++KYAV TCGYC EVQVG KGH+VR CQA+KHQMR
Sbjct: 250 SDGLQGIAIRGMEAWKKLQTGATELMRKYAVHTCGYCPEVQVGPKGHKVRNCQAYKHQMR 309

Query: 512 DGQHAWQEATIDDLIPP 462
           DGQHAWQ+AT++DL+PP
Sbjct: 310 DGQHAWQQATVNDLVPP 326



 Score = 87.8 bits (216), Expect(2) = 5e-48
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = -3

Query: 463 PVYVWHVQDPQGGGLLVHGFKRYYGKLPAVVEMVAQAGARVG*NYSDVMREDVAVPRLDE 284
           PVYVWHV+D Q G  LV+  KRYYG LPAV+E+ AQAGA V  +Y+ +MREDV VP LDE
Sbjct: 326 PVYVWHVRDQQSGEPLVNNLKRYYGMLPAVLELFAQAGAHVSDDYAGLMREDVTVPELDE 385

Query: 283 ERLVV 269
           E+ V+
Sbjct: 386 EKWVI 390


>ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like [Glycine max]
          Length = 404

 Score =  129 bits (325), Expect(2) = 1e-44
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = -2

Query: 692 SDKCSGFAVRGMEAWEKMQSGPIKLVQKYAVQTCGYCSEVQVGSKGHRVRQCQAFKHQMR 513
           SD     AVRGM+AWEKM  G  KL++KYAVQTCGYC EVQVG KGHR R CQAFKHQMR
Sbjct: 264 SDDIQAIAVRGMKAWEKMHGGASKLMEKYAVQTCGYCPEVQVGPKGHRGRNCQAFKHQMR 323

Query: 512 DGQHAWQEATIDDLIPP 462
           DGQHAWQEA IDDL PP
Sbjct: 324 DGQHAWQEARIDDLAPP 340



 Score = 76.6 bits (187), Expect(2) = 1e-44
 Identities = 37/65 (56%), Positives = 50/65 (76%)
 Frame = -3

Query: 463 PVYVWHVQDPQGGGLLVHGFKRYYGKLPAVVEMVAQAGARVG*NYSDVMREDVAVPRLDE 284
           PVYV+H++D Q    LV+  K+YYG LPAVVE+ AQAGA V  +Y+ +MREDV +P++DE
Sbjct: 340 PVYVFHIRDDQPRKPLVNELKKYYGMLPAVVELFAQAGAPVDKSYACMMREDVVIPQMDE 399

Query: 283 ERLVV 269
           E+ VV
Sbjct: 400 EKWVV 404


>ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein 3, mitochondrial-like
           [Glycine max]
          Length = 363

 Score =  119 bits (297), Expect(2) = 2e-43
 Identities = 56/77 (72%), Positives = 60/77 (77%)
 Frame = -2

Query: 692 SDKCSGFAVRGMEAWEKMQSGPIKLVQKYAVQTCGYCSEVQVGSKGHRVRQCQAFKHQMR 513
           SD     AVRGM+AWEKM+ G  KL+ KYAVQTCGY  EVQVG KGHRVR CQAFKHQ+R
Sbjct: 223 SDDIQATAVRGMKAWEKMRGGASKLMGKYAVQTCGYYPEVQVGPKGHRVRNCQAFKHQIR 282

Query: 512 DGQHAWQEATIDDLIPP 462
           DGQ AW  ATIDDL PP
Sbjct: 283 DGQRAWXGATIDDLAPP 299



 Score = 83.2 bits (204), Expect(2) = 2e-43
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = -3

Query: 463 PVYVWHVQDPQGGGLLVHGFKRYYGKLPAVVEMVAQAGARVG*NYSDVMREDVAVPRLDE 284
           PVYV+H++D Q    LV+  KRYYG LPAVVE+ AQAGA V  NY+ +MREDV +P +DE
Sbjct: 299 PVYVYHIRDDQHRKPLVNELKRYYGMLPAVVELFAQAGAPVDKNYASMMREDVVIPEMDE 358

Query: 283 ERLVV 269
           E+LVV
Sbjct: 359 EKLVV 363


Top