BLASTX nr result

ID: Panax21_contig00025085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025085
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282999.2| PREDICTED: transcription factor bHLH130-like...   132   3e-30
emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]   130   1e-29
ref|XP_002304761.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002513457.1| DNA binding protein, putative [Ricinus commu...    98   4e-19
ref|XP_002513187.1| DNA binding protein, putative [Ricinus commu...    97   2e-18

>ref|XP_002282999.2| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
          Length = 411

 Score =  132 bits (331), Expect(2) = 3e-30
 Identities = 84/196 (42%), Positives = 118/196 (60%), Gaps = 21/196 (10%)
 Frame = -3

Query: 560 QQQQMNSGLTRYRSAPSSYFANLINSTGYGGDDCDEFL-------------NPRSSSPES 420
           QQQQMNS L RYRSAPSSYF+N I+     G+DC+EFL             + R SSPE+
Sbjct: 11  QQQQMNSSLMRYRSAPSSYFSNFID-----GEDCEEFLQHRPSSPETERIFSSRPSSPET 65

Query: 419 DQFFSRFMSSCGSEESNSPNLCDIGRNSLVNEP-------VQAQFVASMKHEPEVL-NPX 264
           ++ FSRFM+S G+E+S+S  + ++ +NS    P        Q QF+ASMKH  EVL    
Sbjct: 66  ERIFSRFMASGGTEDSSSHTVMNMRQNSQAMAPESVVVVSQQNQFMASMKHGAEVLQQQQ 125

Query: 263 XXXXXXXQMVYPSQSQLDHKPVGSNSGLDSSYNVSNSMGMDRLPQMKMXXXXXXXXNLIR 84
                  QM+Y + S + H    +   +++SY+  +SMGMD+  Q+K+        NLIR
Sbjct: 126 NGYASGSQMMYQTSSPMPHHNSAAPGTVENSYSAVSSMGMDQSQQIKI--GGGNNSNLIR 183

Query: 83  HSSSPAGLFANINIDN 36
           HSSSPAGLF+++N++N
Sbjct: 184 HSSSPAGLFSHLNVEN 199



 Score = 25.0 bits (53), Expect(2) = 3e-30
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -2

Query: 30  YAVMRGMGNF 1
           YA+MRGMGNF
Sbjct: 201 YAIMRGMGNF 210


>emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
          Length = 446

 Score =  130 bits (327), Expect(2) = 1e-29
 Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 23/198 (11%)
 Frame = -3

Query: 560 QQQQMNSGLTRYRSAPSSYFANLINSTGYGGDDCDEFL-------------NPRSSSPES 420
           QQQQMNS L RYRSAPSSYF+N I+     G+DC+EFL             + R SSPE+
Sbjct: 11  QQQQMNSSLMRYRSAPSSYFSNFID-----GEDCEEFLQHRPSSPETERIFSSRPSSPET 65

Query: 419 DQFFSRFMSSCGSEESNSPNLCDIGRNSLVNEP-------VQAQFVASMKHEPEVL---N 270
           ++ FSRFM+S G+E+S+S  + ++ +NS    P        Q QF+ASMKH  EVL    
Sbjct: 66  ERIFSRFMASGGTEDSSSHTVMNMRQNSQAMAPESVVVVSQQNQFMASMKHGAEVLQQQQ 125

Query: 269 PXXXXXXXXQMVYPSQSQLDHKPVGSNSGLDSSYNVSNSMGMDRLPQMKMXXXXXXXXNL 90
                    QM+Y + S + H    +   +++SY+  +SMGMD+  Q K+        NL
Sbjct: 126 QQNGYASGSQMMYQTSSPMPHHNSAAPGTVENSYSAVSSMGMDQSQQXKI--GGGNNSNL 183

Query: 89  IRHSSSPAGLFANINIDN 36
           IRHSSSPAGLF+++N++N
Sbjct: 184 IRHSSSPAGLFSHLNVEN 201



 Score = 25.0 bits (53), Expect(2) = 1e-29
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -2

Query: 30  YAVMRGMGNF 1
           YA+MRGMGNF
Sbjct: 203 YAIMRGMGNF 212


>ref|XP_002304761.1| predicted protein [Populus trichocarpa] gi|222842193|gb|EEE79740.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  110 bits (275), Expect = 2e-22
 Identities = 79/191 (41%), Positives = 108/191 (56%), Gaps = 18/191 (9%)
 Frame = -3

Query: 557 QQQMNSGLTRYRSAPSSYFANLINSTGYGGDDCDEFLNPRSSSPESDQFFSRFMSSCGSE 378
           Q+QMNSGLTRY+SAPSSYF     S+    D C+EFLN R +SPE+++ F+RF+++ G  
Sbjct: 23  QKQMNSGLTRYQSAPSSYF-----SSNLDRDFCEEFLN-RPTSPETERIFARFLANSGGN 76

Query: 377 ESNSP--NLCDIGRNSLVNEPV-----QAQFVASMK--------HEPEVLNPXXXXXXXX 243
             N P  NLC+I ++S V E V     Q Q +ASM         H+ +            
Sbjct: 77  TENIPGSNLCEIKQDSPVKESVSQINQQPQMMASMNNHSSDTRLHQHQHQQHQHGNYSAS 136

Query: 242 QMVYPSQSQ---LDHKPVGSNSGLDSSYNVSNSMGMDRLPQMKMXXXXXXXXNLIRHSSS 72
           Q  Y S+S+    DH P     G   ++  +NS G++R+P MK         NL+RHSSS
Sbjct: 137 QGFYQSRSKPPLPDHNP-----GSGMNHRSTNSTGLERMPSMK--PSSGNNPNLVRHSSS 189

Query: 71  PAGLFANINID 39
           PAGLF+NINI+
Sbjct: 190 PAGLFSNINIE 200


>ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
           gi|223547365|gb|EEF48860.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 418

 Score = 97.8 bits (242), Expect(2) = 4e-19
 Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 12/188 (6%)
 Frame = -3

Query: 566 DQQQQQMNSGLTRYRSAPSSYFANLINSTGYGGDDCDEFLNPRSSSPESDQFFSRFMSSC 387
           +  Q+QMNSGL RY+SAPSSYF++  +      D  D+FLN R +SPE+++ F+RF+++ 
Sbjct: 18  NHHQKQMNSGLQRYQSAPSSYFSSFQDK-----DFVDDFLN-RPTSPETERIFARFLANS 71

Query: 386 GSEESNSPNLCDIG----RNSLVNEPV-----QAQFVASMKHEPEV---LNPXXXXXXXX 243
           G   +++ +  ++G    + S V E V     QA  +ASM    +     +         
Sbjct: 72  GGSSTDNISNQNLGAVIKQESPVKEAVTQVSQQAHIMASMNDSDQTRLHRHQQQQQSNYS 131

Query: 242 QMVYPSQSQLDHKPVGSNSGLDSSYNVSNSMGMDRLPQMKMXXXXXXXXNLIRHSSSPAG 63
              Y SQS+      GS S +D  Y +  SM M+RL QMK         NL+RHSSSPAG
Sbjct: 132 SGFYQSQSKPPLPDHGSGSSMD--YRIMTSMAMERLSQMK--PSAGNNSNLVRHSSSPAG 187

Query: 62  LFANINID 39
           LF+NINI+
Sbjct: 188 LFSNINIE 195



 Score = 21.9 bits (45), Expect(2) = 4e-19
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -2

Query: 30  YAVMRGMGNF 1
           YAV+RGMG+F
Sbjct: 200 YAVIRGMGDF 209


>ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
           gi|223547685|gb|EEF49178.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 432

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 72/184 (39%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
 Frame = -3

Query: 566 DQQQQQMNSGLTRYRSAPSSYFANLIN-STGYGGDDCDEFLNPRSSSPESDQFFSRFMSS 390
           +Q     NSGL RYRSAP S+  +LIN +T  GG++C ++ + RSSSPE +   SRFMS+
Sbjct: 47  NQDPLHHNSGLMRYRSAPGSFLDSLINGTTSGGGNECQDYRSFRSSSPEMETILSRFMST 106

Query: 389 C-GSEESNSPNLCDIGRNSLVNEPVQAQFVASMKHEPEVLNPXXXXXXXXQMVYPSQS-- 219
           C GS +SNS NL + G                MK E E            QMVY S +  
Sbjct: 107 CNGSGDSNSQNLQEYGER------------PEMKQEME----------DPQMVYQSSAVN 144

Query: 218 --QLDHKPVGSNSGLDSSYNVSNSMGMDR-LPQMKMXXXXXXXXNLIRHSSSPAGLFANI 48
               +   V  ++ +DSS+NV N M M+  LP  K         NL+R  SSPAG F+N+
Sbjct: 145 NLANNGNSVDISNSVDSSFNVMNPMAMENSLPARKF--SAVNGSNLVRQHSSPAGFFSNL 202

Query: 47  NIDN 36
            +DN
Sbjct: 203 GVDN 206