BLASTX nr result

ID: Panax21_contig00025082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025082
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875200.1| hypothetical protein ARALYDRAFT_484241 [Arab...    57   1e-06
ref|XP_002522493.1| hypothetical protein RCOM_0837900 [Ricinus c...    55   8e-06
ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana] ...    55   8e-06

>ref|XP_002875200.1| hypothetical protein ARALYDRAFT_484241 [Arabidopsis lyrata subsp.
           lyrata] gi|297321038|gb|EFH51459.1| hypothetical protein
           ARALYDRAFT_484241 [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
 Frame = -1

Query: 330 TPPKTINLLGVISETNRIMKAHSRHFLA------XXXXXXXXXXXXXXXXXXLHYSLSHN 169
           +PP  +NL  ++SE+ RI+ AHSRHFLA                           S SHN
Sbjct: 9   SPPPPVNLWIILSESKRIINAHSRHFLALSVLFLLPLCFSVTVYPSVFRLITDQSSASHN 68

Query: 168 PVNPTTSQFLLRLAATVPLSETLILAVVFTILIALLSISAFATISYSTYHGFYGRP 1
            V+       L     V    T++L + + +++ + ++ A  +I+YS + GFYGRP
Sbjct: 69  SVSLLRG---LHQNDDVDTKTTVLLLIGYIVVVTVFNLLAIGSIAYSVFQGFYGRP 121


>ref|XP_002522493.1| hypothetical protein RCOM_0837900 [Ricinus communis]
           gi|223538378|gb|EEF39985.1| hypothetical protein
           RCOM_0837900 [Ricinus communis]
          Length = 178

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
 Frame = -1

Query: 327 PPKTINLLGVISETNRIMKAHSRHFLAXXXXXXXXXXXXXXXXXXLHYSLSHNPVNPTTS 148
           PP  ++L  V+SE+ RI+ AHSRHFLA                  L   L+ +  +   S
Sbjct: 14  PP--LDLCAVLSESKRIINAHSRHFLALSVLFLLPISFSITVFPTLQNLLTQS--STLNS 69

Query: 147 QFLLRLAATVP------LSETLILAVVFTILIALLSISAFATISYSTYHGFY 10
           + LL +    P       + TLIL++ F++ I +L++ A  +I+YS  HGFY
Sbjct: 70  KILLSVVVFSPDPSHLFTTRTLILSIAFSVFIFVLALLALGSITYSVLHGFY 121


>ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6671937|gb|AAF23197.1|AC016795_10 unknown protein
           [Arabidopsis thaliana] gi|332641580|gb|AEE75101.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 348

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
 Frame = -1

Query: 324 PKTINLLGVISETNRIMKAHSRHFLAXXXXXXXXXXXXXXXXXXLHY------SLSHNPV 163
           P  +NL  ++SE+ RI+ AHSRHFLA                  +        S SHN V
Sbjct: 10  PPPLNLWIILSESKRIINAHSRHFLALSVLFLLPLCFSITVYPSVFLLITDQSSASHNTV 69

Query: 162 NPTTSQFLLRLAATVPLSETLILAVVFTILIALLSISAFATISYSTYHGFYGRP 1
           +             +    T++L + + ++I + ++ A  +I+YS + GFYGRP
Sbjct: 70  SLLRGGLHNNNDDDIDTKTTVLLVIGYIVVITVFNLLAIGSIAYSVFQGFYGRP 123