BLASTX nr result

ID: Panax21_contig00025059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025059
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852...   170   1e-40
emb|CBI17494.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002521561.1| replication factor C / DNA polymerase III ga...   159   2e-37
ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_003538861.1| PREDICTED: uncharacterized protein LOC100795...   155   4e-36

>ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera]
          Length = 766

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/106 (77%), Positives = 90/106 (84%)
 Frame = -2

Query: 504 IPLGWEEFVVDLAAEILSDASTNRLFIIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAS 325
           IPLGWEE +V+LAAE+L D S NRLF +RGK Q+LLVDFVHPKLILQKL+EQFLKG +AS
Sbjct: 660 IPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKLLVDFVHPKLILQKLVEQFLKGTDAS 719

Query: 324 LKRELYYWHGYYDKRLPMGTSALLKLEEFVAKFMGIYRMSSSNHQY 187
            KR+LYYWH YYDKRLP GTSALLKLEEFVAKFM I R S  N QY
Sbjct: 720 QKRDLYYWHAYYDKRLPAGTSALLKLEEFVAKFMSIRRKSLGNRQY 765


>emb|CBI17494.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/106 (77%), Positives = 90/106 (84%)
 Frame = -2

Query: 504 IPLGWEEFVVDLAAEILSDASTNRLFIIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAS 325
           IPLGWEE +V+LAAE+L D S NRLF +RGK Q+LLVDFVHPKLILQKL+EQFLKG +AS
Sbjct: 602 IPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKLLVDFVHPKLILQKLVEQFLKGTDAS 661

Query: 324 LKRELYYWHGYYDKRLPMGTSALLKLEEFVAKFMGIYRMSSSNHQY 187
            KR+LYYWH YYDKRLP GTSALLKLEEFVAKFM I R S  N QY
Sbjct: 662 QKRDLYYWHAYYDKRLPAGTSALLKLEEFVAKFMSIRRKSLGNRQY 707


>ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223539239|gb|EEF40832.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 779

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/105 (71%), Positives = 90/105 (85%)
 Frame = -2

Query: 504 IPLGWEEFVVDLAAEILSDASTNRLFIIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAS 325
           IP  WEE +++LAAEILSD S  RLF++RGKFQ+LL+DFVHPKLIL KL+EQFLKGV+AS
Sbjct: 670 IPSSWEEVLIELAAEILSDPSPKRLFMVRGKFQKLLLDFVHPKLILLKLVEQFLKGVDAS 729

Query: 324 LKRELYYWHGYYDKRLPMGTSALLKLEEFVAKFMGIYRMSSSNHQ 190
            KRELYYWH YY+KR+P G+SALLKLEEFVAKFM ++R   S+ Q
Sbjct: 730 SKRELYYWHAYYEKRIPTGSSALLKLEEFVAKFMSLHRKRFSSRQ 774


>ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|222853150|gb|EEE90697.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score =  155 bits (392), Expect = 3e-36
 Identities = 79/118 (66%), Positives = 89/118 (75%), Gaps = 12/118 (10%)
 Frame = -2

Query: 504  IPLGWEEFVVDLAAEILSDASTNRLFIIRGKFQRLLVDFVHPKLIL------------QK 361
            IP GWEE +V+LA EIL D S N+LF  RGK +RLLVDFV+PKLIL            QK
Sbjct: 806  IPFGWEEVLVELATEILIDPSPNKLFSARGKLKRLLVDFVNPKLILLKYTFLIELHLQQK 865

Query: 360  LIEQFLKGVEASLKRELYYWHGYYDKRLPMGTSALLKLEEFVAKFMGIYRMSSSNHQY 187
            L+EQFLKGVEA+ +RELYYWH YYDKRLP GT+ALLKLEEFVAKFM +YR SS   QY
Sbjct: 866  LVEQFLKGVEANSRRELYYWHAYYDKRLPTGTTALLKLEEFVAKFMSMYRKSSGTRQY 923


>ref|XP_003538861.1| PREDICTED: uncharacterized protein LOC100795321 [Glycine max]
          Length = 731

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/106 (68%), Positives = 89/106 (83%)
 Frame = -2

Query: 504 IPLGWEEFVVDLAAEILSDASTNRLFIIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAS 325
           IP+GWEE V+++AAEIL+D S +RL  IRGKFQ LL+DFVHPKLILQKL+E  LK +EAS
Sbjct: 625 IPVGWEEIVIEVAAEILADPSFSRLLSIRGKFQMLLLDFVHPKLILQKLVEHLLKRIEAS 684

Query: 324 LKRELYYWHGYYDKRLPMGTSALLKLEEFVAKFMGIYRMSSSNHQY 187
           L+RELYYWH YYD+RLP G +ALLKLEEFVAKFM + R +S + +Y
Sbjct: 685 LRRELYYWHAYYDRRLPPGITALLKLEEFVAKFMSMCRKNSGSRKY 730


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