BLASTX nr result

ID: Panax21_contig00025051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025051
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]    61   3e-14
ref|XP_002267588.1| PREDICTED: uncharacterized protein LOC100249...    61   3e-14
ref|XP_003631526.1| PREDICTED: uncharacterized protein LOC100249...    61   3e-14
ref|XP_002519892.1| clathrin binding protein, putative [Ricinus ...    48   8e-11
ref|XP_003612558.1| Rho guanine nucleotide exchange factor [Medi...    49   1e-09

>emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
          Length = 875

 Score = 61.2 bits (147), Expect(3) = 3e-14
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 335 KYGTETQSGGSPLARAALQFGTAHGSIENEKKTMLRIFVDQV 210
           KYGTE QS GSPLARAAL FG +H S+E E++T+L +F DQV
Sbjct: 88  KYGTENQSTGSPLARAALYFGNSHSSMEKERETLLGVFCDQV 129



 Score = 42.4 bits (98), Expect(3) = 3e-14
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = -1

Query: 505 HFQRDIIRGVEGFVSASKKQLEI 437
           HFQ+DI+RG+EGFVS S KQ+EI
Sbjct: 56  HFQKDIVRGIEGFVSTSSKQMEI 78



 Score = 21.6 bits (44), Expect(3) = 3e-14
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 366 LARKLAENCCK 334
           + R++AE+CCK
Sbjct: 78  IVRRMAEDCCK 88


>ref|XP_002267588.1| PREDICTED: uncharacterized protein LOC100249391 isoform 1 [Vitis
           vinifera] gi|296085501|emb|CBI29233.3| unnamed protein
           product [Vitis vinifera]
          Length = 371

 Score = 61.2 bits (147), Expect(3) = 3e-14
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 335 KYGTETQSGGSPLARAALQFGTAHGSIENEKKTMLRIFVDQV 210
           KYGTE QS GSPLARAAL FG +H S+E E++T+L +F DQV
Sbjct: 88  KYGTENQSTGSPLARAALYFGNSHSSMEKERETLLGVFCDQV 129



 Score = 42.4 bits (98), Expect(3) = 3e-14
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = -1

Query: 505 HFQRDIIRGVEGFVSASKKQLEI 437
           HFQ+DI+RG+EGFVS S KQ+EI
Sbjct: 56  HFQKDIVRGIEGFVSTSSKQMEI 78



 Score = 21.6 bits (44), Expect(3) = 3e-14
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 366 LARKLAENCCK 334
           + R++AE+CCK
Sbjct: 78  IVRRMAEDCCK 88


>ref|XP_003631526.1| PREDICTED: uncharacterized protein LOC100249391 isoform 2 [Vitis
           vinifera]
          Length = 350

 Score = 61.2 bits (147), Expect(3) = 3e-14
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 335 KYGTETQSGGSPLARAALQFGTAHGSIENEKKTMLRIFVDQV 210
           KYGTE QS GSPLARAAL FG +H S+E E++T+L +F DQV
Sbjct: 67  KYGTENQSTGSPLARAALYFGNSHSSMEKERETLLGVFCDQV 108



 Score = 42.4 bits (98), Expect(3) = 3e-14
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = -1

Query: 505 HFQRDIIRGVEGFVSASKKQLEI 437
           HFQ+DI+RG+EGFVS S KQ+EI
Sbjct: 35  HFQKDIVRGIEGFVSTSSKQMEI 57



 Score = 21.6 bits (44), Expect(3) = 3e-14
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 366 LARKLAENCCK 334
           + R++AE+CCK
Sbjct: 57  IVRRMAEDCCK 67


>ref|XP_002519892.1| clathrin binding protein, putative [Ricinus communis]
           gi|223540938|gb|EEF42496.1| clathrin binding protein,
           putative [Ricinus communis]
          Length = 368

 Score = 47.8 bits (112), Expect(3) = 8e-11
 Identities = 24/49 (48%), Positives = 33/49 (67%)
 Frame = -3

Query: 335 KYGTETQSGGSPLARAALQFGTAHGSIENEKKTMLRIFVDQVVLILSRL 189
           KYG +TQ+    +ARA LQFGT+H  +ENE++T+  I  DQV + L  L
Sbjct: 91  KYGADTQTTNLHVARAVLQFGTSHNLMENERETLHGILGDQVSVPLRAL 139



 Score = 40.0 bits (92), Expect(3) = 8e-11
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = -1

Query: 505 HFQRDIIRGVEGFVSASKKQLEI 437
           HFQ++I+RG+EGF+S S KQ+EI
Sbjct: 59  HFQKNIVRGIEGFISVSSKQIEI 81



 Score = 25.4 bits (54), Expect(3) = 8e-11
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 372 IFLARKLAENCCK 334
           I +ARKLAE+CCK
Sbjct: 79  IEIARKLAEDCCK 91


>ref|XP_003612558.1| Rho guanine nucleotide exchange factor [Medicago truncatula]
           gi|355513893|gb|AES95516.1| Rho guanine nucleotide
           exchange factor [Medicago truncatula]
          Length = 366

 Score = 48.5 bits (114), Expect(3) = 1e-09
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = -3

Query: 347 KTVAKYGTETQSGGS--PLARAALQFGTAHGSIENEKKTMLRIFVDQV 210
           K   KYG E ++ GS  PLARA+LQFG ++  +ENE++T+L I  DQ+
Sbjct: 87  KDCCKYGNENENQGSTYPLARASLQFGNSYEILENERETLLGILGDQI 134



 Score = 38.5 bits (88), Expect(3) = 1e-09
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = -1

Query: 505 HFQRDIIRGVEGFVSASKKQLEI 437
           HFQR I+RGVEG +S S KQ+EI
Sbjct: 59  HFQRHIVRGVEGLISVSSKQMEI 81



 Score = 21.9 bits (45), Expect(3) = 1e-09
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 366 LARKLAENCCK 334
           + RKLA++CCK
Sbjct: 81  IVRKLAKDCCK 91


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