BLASTX nr result

ID: Panax21_contig00025048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025048
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24211.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxido...   168   5e-40
emb|CAN79349.1| hypothetical protein VITISV_019897 [Vitis vinifera]   168   5e-40
ref|XP_002298303.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersi...   139   2e-31

>emb|CBI24211.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/128 (67%), Positives = 104/128 (81%)
 Frame = -3

Query: 386 MECSSLSSIFSTLKPPLLPSISGTTRRKLRASIEVSACCSYQKFIHFALDETKRHTHLIP 207
           ME SSLS  FSTLK PL    +    +   A +EVSAC SYQKF+HFALDETKR THL+P
Sbjct: 58  MESSSLS-FFSTLKRPLSTGSNINNFKPKGALVEVSAC-SYQKFLHFALDETKRRTHLLP 115

Query: 206 SPLQESFSSLTALDGKTELQMISFQAPKIRLLRSFSVEGSGGIQVLDFALFPKPEFDLPI 27
           SPLQE+F+S+ A+DGK +LQM+SFQAPKIRLLR+ S+E S G+Q+LDFA+FP+ EFDLPI
Sbjct: 116 SPLQENFNSMMAMDGKAKLQMVSFQAPKIRLLRNLSIEASEGMQILDFAVFPEQEFDLPI 175

Query: 26  FCANFFTS 3
           FCANFFT+
Sbjct: 176 FCANFFTT 183


>ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxidoreductase,
           chloroplastic-like [Vitis vinifera]
          Length = 330

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/128 (67%), Positives = 104/128 (81%)
 Frame = -3

Query: 386 MECSSLSSIFSTLKPPLLPSISGTTRRKLRASIEVSACCSYQKFIHFALDETKRHTHLIP 207
           ME SSLS  FSTLK PL    +    +   A +EVSAC SYQKF+HFALDETKR THL+P
Sbjct: 1   MESSSLS-FFSTLKRPLSTGSNINNFKPKGALVEVSAC-SYQKFLHFALDETKRRTHLLP 58

Query: 206 SPLQESFSSLTALDGKTELQMISFQAPKIRLLRSFSVEGSGGIQVLDFALFPKPEFDLPI 27
           SPLQE+F+S+ A+DGK +LQM+SFQAPKIRLLR+ S+E S G+Q+LDFA+FP+ EFDLPI
Sbjct: 59  SPLQENFNSMMAMDGKAKLQMVSFQAPKIRLLRNLSIEASEGMQILDFAVFPEQEFDLPI 118

Query: 26  FCANFFTS 3
           FCANFFT+
Sbjct: 119 FCANFFTT 126


>emb|CAN79349.1| hypothetical protein VITISV_019897 [Vitis vinifera]
          Length = 191

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/128 (67%), Positives = 104/128 (81%)
 Frame = -3

Query: 386 MECSSLSSIFSTLKPPLLPSISGTTRRKLRASIEVSACCSYQKFIHFALDETKRHTHLIP 207
           ME SSLS  FSTLK PL    +    +   A +EVSAC SYQKF+HFALDETKR THL+P
Sbjct: 58  MESSSLS-FFSTLKRPLSTGSNINNFKPKGALVEVSAC-SYQKFLHFALDETKRRTHLLP 115

Query: 206 SPLQESFSSLTALDGKTELQMISFQAPKIRLLRSFSVEGSGGIQVLDFALFPKPEFDLPI 27
           SPLQE+F+S+ A+DGK +LQM+SFQAPKIRLLR+ S+E S G+Q+LDFA+FP+ EFDLPI
Sbjct: 116 SPLQENFNSMMAMDGKAKLQMVSFQAPKIRLLRNLSIEASEGMQILDFAVFPEQEFDLPI 175

Query: 26  FCANFFTS 3
           FCANFFT+
Sbjct: 176 FCANFFTT 183


>ref|XP_002298303.1| predicted protein [Populus trichocarpa] gi|222845561|gb|EEE83108.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/89 (75%), Positives = 79/89 (88%)
 Frame = -3

Query: 269 SYQKFIHFALDETKRHTHLIPSPLQESFSSLTALDGKTELQMISFQAPKIRLLRSFSVEG 90
           SYQKFIHFALDETKR T L+PSPLQE +SS+TA+DG TELQM+SFQAPK+RLLRS S+E 
Sbjct: 21  SYQKFIHFALDETKRRTLLVPSPLQEKYSSMTAMDGTTELQMLSFQAPKMRLLRSLSIEN 80

Query: 89  SGGIQVLDFALFPKPEFDLPIFCANFFTS 3
              IQ+LDFA+F +PEFD+PIFCANFFT+
Sbjct: 81  E-AIQILDFAVFSRPEFDVPIFCANFFTT 108


>ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersicum]
           gi|62149356|dbj|BAD93478.1| phytochromobilin synthase
           [Solanum lycopersicum] gi|62149358|dbj|BAD93479.1|
           phytochromobilin synthase [Solanum lycopersicum]
          Length = 342

 Score =  139 bits (350), Expect = 2e-31
 Identities = 78/144 (54%), Positives = 93/144 (64%), Gaps = 16/144 (11%)
 Frame = -3

Query: 386 MECSSLSSIFSTLKPPLLPSISG---TTRRKLRASIEVSACC-------------SYQKF 255
           MEC S    F    P  +   S    +  RK R+  EV + C             SY+K 
Sbjct: 1   MECFSSLGWFCISNPSFIGLKSKKKYSLSRKCRSFNEVGSKCVRMSYTENESSGVSYKKL 60

Query: 254 IHFALDETKRHTHLIPSPLQESFSSLTALDGKTELQMISFQAPKIRLLRSFSVEGSGGIQ 75
           IHFAL+ET  HT L PSPLQE +SSL ++D KTELQM+SF+A KIRLLRS  +EG+ G+Q
Sbjct: 61  IHFALEETNTHTLLSPSPLQEKYSSLLSMDDKTELQMLSFEAHKIRLLRSLCIEGTDGMQ 120

Query: 74  VLDFALFPKPEFDLPIFCANFFTS 3
           VLDFA FPKPEFDLPIFCANFFT+
Sbjct: 121 VLDFAAFPKPEFDLPIFCANFFTT 144


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