BLASTX nr result

ID: Panax21_contig00025046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025046
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29756.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...    67   1e-09
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...    55   8e-06

>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
 Frame = -2

Query: 390 SSRNYIKPGRSLPLVKDVSTLSSEDTRRKYPRTSSDANN-FSGNMSTHQNFNSTNTGIGK 214
           SSRNY KPG+  PL+KD S     D R+   ++S + NN +  +   HQN   TN+   +
Sbjct: 69  SSRNYSKPGKMAPLLKDASVEFPRDVRKCNLQSSHNTNNQYLEHNLPHQNLGETNSSYSE 128

Query: 213 SKGMDSLFPSSTSHVSEKAASR--QNEVHVSMHNYSHASVINGLSSKHTAHASPVNGFQN 40
           +         S S  +E A     QNE   SM   SH  V+   S     H   V     
Sbjct: 129 TASCRGNSFRSGSACAENAGREGGQNETKPSMLYNSHIQVVGQSSGTCNVHTGQVKELVG 188

Query: 39  TFPDDIGDDDLLE 1
            FP+   DDD+LE
Sbjct: 189 AFPNGTDDDDILE 201


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
 Frame = -2

Query: 390 SSRNYIKPGRSLPLVKDVSTLSSEDTRRKYPRTSSDANN-FSGNMSTHQNFNSTNTGIGK 214
           SSRNY KPG+  PL+KD S     D R+   ++S + NN +  +   HQN   TN+   +
Sbjct: 58  SSRNYSKPGKMAPLLKDASVEFPRDVRKCNLQSSHNTNNQYLEHNLPHQNLGETNSSYSE 117

Query: 213 SKGMDSLFPSSTSHVSEKAASR--QNEVHVSMHNYSHASVINGLSSKHTAHASPVNGFQN 40
           +         S S  +E A     QNE   SM   SH  V+   S     H   V     
Sbjct: 118 TASCRGNSFRSGSACAENAGREGGQNETKPSMLYNSHIQVVGQSSGTCNVHTGQVKELVG 177

Query: 39  TFPDDIGDDDLLE 1
            FP+   DDD+LE
Sbjct: 178 AFPNGTDDDDILE 190


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
 Frame = -2

Query: 390 SSRNYIKPGRSLPLVKDVSTLSSEDTRRKYPRTSSDANNFSGNMSTHQNFNSTNTGIGKS 211
           S RNY++PG++ PL K+ + L     R  +  +SSD   +S  +  HQNF+ +     KS
Sbjct: 97  SCRNYLQPGKTGPL-KNANLLQDVGQRPTFC-SSSDGGKYSECLHVHQNFSESGAKNNKS 154

Query: 210 -KGMDSLFPSSTSHVSE--KAASRQNEVHVSMHNYSHASVINGLSSKHTAHASPVNGFQN 40
            + M +  P   +  +E      RQ+++  S  N + +   +G  S H+ + S       
Sbjct: 155 ERYMGNYVPQDNATAAETGNGLQRQSQIKASAANNTESKTFSGSFSDHSVYTSHNKESAE 214

Query: 39  TFPDDIGDDDLL 4
              D I DDDLL
Sbjct: 215 ASTDFIDDDDLL 226


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