BLASTX nr result

ID: Panax21_contig00025040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025040
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransfera...   338   3e-91
ref|XP_002315363.1| precursor of transferase serine hydroxymethy...   335   2e-90
ref|XP_002310916.1| precursor of transferase serine hydroxymethy...   335   2e-90
gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Po...   335   2e-90
gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides]      335   2e-90

>sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
           Short=SHMT; AltName: Full=Glycine
           hydroxymethyltransferase; AltName: Full=Serine
           methylase; Flags: Precursor gi|169158|gb|AAA33687.1|
           serine hydroxymethyltransferase [Pisum sativum]
          Length = 518

 Score =  338 bits (866), Expect = 3e-91
 Identities = 163/167 (97%), Positives = 167/167 (100%)
 Frame = -3

Query: 502 GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPSNF 323
           GSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDPAKWGVNVQPLSGSPSNF
Sbjct: 96  GSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNF 155

Query: 322 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 143
           QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQ
Sbjct: 156 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQ 215

Query: 142 MEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 2
           +EKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKA+LLADMAHI
Sbjct: 216 LEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVLLADMAHI 262


>ref|XP_002315363.1| precursor of transferase serine hydroxymethyltransferase 7 [Populus
           trichocarpa] gi|222864403|gb|EEF01534.1| precursor of
           transferase serine hydroxymethyltransferase 7 [Populus
           trichocarpa]
          Length = 520

 Score =  335 bits (860), Expect = 2e-90
 Identities = 163/167 (97%), Positives = 166/167 (99%)
 Frame = -3

Query: 502 GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPSNF 323
           GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQ LSGSP+NF
Sbjct: 99  GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPANF 158

Query: 322 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 143
           QVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ
Sbjct: 159 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 218

Query: 142 MEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 2
           +EKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI
Sbjct: 219 LEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 265


>ref|XP_002310916.1| precursor of transferase serine hydroxymethyltransferase 2 [Populus
           trichocarpa] gi|222850736|gb|EEE88283.1| precursor of
           transferase serine hydroxymethyltransferase 2 [Populus
           trichocarpa]
          Length = 518

 Score =  335 bits (859), Expect = 2e-90
 Identities = 163/167 (97%), Positives = 166/167 (99%)
 Frame = -3

Query: 502 GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPSNF 323
           GSVMTNKYSEGYPGARYYGGNE+IDMAESLCQKRALEAFRLDPAKWGVNVQ LSGSPSNF
Sbjct: 97  GSVMTNKYSEGYPGARYYGGNEFIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPSNF 156

Query: 322 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 143
           QVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ
Sbjct: 157 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 216

Query: 142 MEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 2
           +EKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI
Sbjct: 217 LEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 263


>gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
          Length = 520

 Score =  335 bits (859), Expect = 2e-90
 Identities = 163/167 (97%), Positives = 166/167 (99%)
 Frame = -3

Query: 502 GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPSNF 323
           GSVMTNKYSEGYPGARYYGGNE+IDMAESLCQKRALEAFRLDPAKWGVNVQ LSGSPSNF
Sbjct: 99  GSVMTNKYSEGYPGARYYGGNEFIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPSNF 158

Query: 322 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 143
           QVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ
Sbjct: 159 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 218

Query: 142 MEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 2
           +EKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI
Sbjct: 219 LEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 265


>gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 520

 Score =  335 bits (859), Expect = 2e-90
 Identities = 163/167 (97%), Positives = 166/167 (99%)
 Frame = -3

Query: 502 GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPSNF 323
           GSVMTNKYSEGYPGARYYGGNE+IDMAESLCQKRALEAFRLDPAKWGVNVQ LSGSPSNF
Sbjct: 99  GSVMTNKYSEGYPGARYYGGNEFIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPSNF 158

Query: 322 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 143
           QVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ
Sbjct: 159 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 218

Query: 142 MEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 2
           +EKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI
Sbjct: 219 LEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHI 265


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