BLASTX nr result

ID: Panax21_contig00025035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025035
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51027.1|AC069474_26 unknown protein; 24137-33208 [Arabidop...    73   6e-12
ref|NP_001118617.1| Oligosaccaryltransferase [Arabidopsis thalia...    73   2e-11
ref|XP_004142744.1| PREDICTED: uncharacterized protein LOC101210...    71   8e-11
tpg|DAA63643.1| TPA: hypothetical protein ZEAMMB73_288712 [Zea m...    67   9e-11
ref|XP_002311159.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-10

>gb|AAG51027.1|AC069474_26 unknown protein; 24137-33208 [Arabidopsis thaliana]
          Length = 1211

 Score = 73.2 bits (178), Expect(2) = 6e-12
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +2

Query: 227  DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEA 328
            DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEA
Sbjct: 1177 DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEA 1210



 Score = 21.9 bits (45), Expect(2) = 6e-12
 Identities = 10/13 (76%), Positives = 12/13 (92%), Gaps = 1/13 (7%)
 Frame = +3

Query: 126  QPEK-MIDDQDLG 161
            +P+K MIDDQDLG
Sbjct: 1170 RPDKTMIDDQDLG 1182


>ref|NP_001118617.1| Oligosaccaryltransferase [Arabidopsis thaliana]
           gi|75273278|sp|Q9LHK3.1|OST4A_ARATH RecName:
           Full=Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 4A
           gi|9294352|dbj|BAB02249.1| unnamed protein product
           [Arabidopsis thaliana] gi|21618209|gb|AAM67259.1|
           unknown [Arabidopsis thaliana]
           gi|332641698|gb|AEE75219.1| Oligosaccaryltransferase
           [Arabidopsis thaliana]
          Length = 37

 Score = 73.2 bits (178), Expect(2) = 2e-11
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +2

Query: 227 DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEA 328
           DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEA
Sbjct: 3   DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEA 36



 Score = 20.8 bits (42), Expect(2) = 2e-11
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 138 MIDDQDLG 161
           MIDDQDLG
Sbjct: 1   MIDDQDLG 8


>ref|XP_004142744.1| PREDICTED: uncharacterized protein LOC101210606 [Cucumis sativus]
          Length = 37

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +2

Query: 227 DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEAN 331
           DDQ+LGF+ANFLGIF+FALVIAYHYVTADPKYE N
Sbjct: 3   DDQELGFLANFLGIFVFALVIAYHYVTADPKYEGN 37


>tpg|DAA63643.1| TPA: hypothetical protein ZEAMMB73_288712 [Zea mays]
          Length = 117

 Score = 67.0 bits (162), Expect(2) = 9e-11
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +2

Query: 227 DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEAN 331
           DDQDLGF ANFLGIFIF LVIAYH+V ADPKYE N
Sbjct: 83  DDQDLGFFANFLGIFIFVLVIAYHFVMADPKYEGN 117



 Score = 24.3 bits (51), Expect(2) = 9e-11
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 123 DQPEKMIDDQDLG 161
           D+P  M DDQDLG
Sbjct: 76  DRPRMMFDDQDLG 88


>ref|XP_002311159.1| predicted protein [Populus trichocarpa] gi|222850979|gb|EEE88526.1|
           predicted protein [Populus trichocarpa]
          Length = 53

 Score = 68.6 bits (166), Expect(2) = 1e-10
 Identities = 31/35 (88%), Positives = 31/35 (88%)
 Frame = +2

Query: 227 DDQDLGFIANFLGIFIFALVIAYHYVTADPKYEAN 331
           DDQDLGF ANFLGIFIF LVIAYHYV ADPKYE N
Sbjct: 19  DDQDLGFCANFLGIFIFVLVIAYHYVVADPKYEGN 53



 Score = 22.3 bits (46), Expect(2) = 1e-10
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 123 DQPEKMIDDQDLG 161
           D  +KM DDQDLG
Sbjct: 12  DLLQKMFDDQDLG 24


Top