BLASTX nr result
ID: Panax21_contig00025033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00025033
(1931 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo... 360 7e-97
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo... 358 9e-97
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc... 358 9e-97
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] gi... 353 2e-95
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc... 355 2e-95
>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 360 bits (924), Expect = 7e-97
Identities = 182/370 (49%), Positives = 240/370 (64%), Gaps = 10/370 (2%)
Frame = +3
Query: 327 LNNHSEQIRGKPRMVINYKRLNDNIENDGYKIPTKDQLLNSIQKCTIFSKFDCKSGFWQV 506
+ NH+E++RGK RMVINYKRLNDN D Y IP K + +N IQ FSKFD K+GFWQV
Sbjct: 1328 VRNHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQV 1387
Query: 507 KMHPDSIHWTAFSCPEGHFEWLVMPFGVKIAPSVFQRKMDTIFLKHSKFVIAYIDDILVF 686
KM +SI WTAF+CP+GH+EWLVMP G+K AP++FQRKM IF ++ +F++ YIDD+LVF
Sbjct: 1388 KMAEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVF 1447
Query: 687 SKNLKEHYGHLHIVLNEFRNNGIIIS-------KPVITFLGSILGNGTIQLSPHISKTVL 845
S+ KEH HL I + NG+I+S K I FLG +G G I L HI+K +L
Sbjct: 1448 SRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKIL 1507
Query: 846 NKPDKLETLKDIQSFLGLANQARPYVKDLNKLLAPLYQKTSKNGQRFFNSEDIKLVQKIK 1025
PD + K +Q FLGL N AR ++ +L KL PLY K KNGQR+FNSEDIKLV+ IK
Sbjct: 1508 EFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIKLVRLIK 1567
Query: 1026 QVLQNXXXXXXXXXXXXXIIQCDGCITGWGAILSKKPHKYSPKTEEKICRYGSGKFKVTE 1205
+ ++ II+ D GWGA+L ++P KYS K+EEK+CRY SG +K+ +
Sbjct: 1568 ERVKELKPLELPLEESYFIIETDASQLGWGAVLKQRPTKYSSKSEEKVCRYASGSYKL-K 1626
Query: 1206 NIPSLDCEILAVIYSMNHFRLLIIDKPEITIRTDCENIVKF---MKHKTLSRKRWLTFID 1376
+ + D EILA+I ++N FRL + K E T+RTDCE I ++ + K S +RW+ F D
Sbjct: 1627 TVGNTDREILAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLNSKKSSTRRWILFED 1685
Query: 1377 YIVNTGINKI 1406
I G I
Sbjct: 1686 IITGNGYKVI 1695
>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 358 bits (918), Expect(2) = 9e-97
Identities = 182/370 (49%), Positives = 240/370 (64%), Gaps = 10/370 (2%)
Frame = +3
Query: 327 LNNHSEQIRGKPRMVINYKRLNDNIENDGYKIPTKDQLLNSIQKCTIFSKFDCKSGFWQV 506
+ NH+E++RGK RMVINYKRLNDN D Y IP K + +N IQ FSKFD K+GFWQV
Sbjct: 1328 VRNHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQV 1387
Query: 507 KMHPDSIHWTAFSCPEGHFEWLVMPFGVKIAPSVFQRKMDTIFLKHSKFVIAYIDDILVF 686
KM +SI WTAF+CP+GH+EWLVMP G+K AP++FQRKM IF ++ +F++ YIDD+LVF
Sbjct: 1388 KMAEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVF 1447
Query: 687 SKNLKEHYGHLHIVLNEFRNNGIIIS-------KPVITFLGSILGNGTIQLSPHISKTVL 845
S+ KEH HL I + NG+I+S K I FLG +G G I L HI+K +L
Sbjct: 1448 SRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKIL 1507
Query: 846 NKPDKLETLKDIQSFLGLANQARPYVKDLNKLLAPLYQKTSKNGQRFFNSEDIKLVQKIK 1025
PD + K +Q FLGL N AR ++ +L KL PLY K KNGQR+FNSEDIKLV+ IK
Sbjct: 1508 QFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIKLVRLIK 1567
Query: 1026 QVLQNXXXXXXXXXXXXXIIQCDGCITGWGAILSKKPHKYSPKTEEKICRYGSGKFKVTE 1205
+ ++ II+ D GWGAIL ++P K+S K+EEKICRY SG +K+ +
Sbjct: 1568 ERVKELKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASGSYKL-K 1626
Query: 1206 NIPSLDCEILAVIYSMNHFRLLIIDKPEITIRTDCENIVKF---MKHKTLSRKRWLTFID 1376
+ + D EI+A+I ++N FRL + K E T+RTDCE I ++ + K S +RW+ F D
Sbjct: 1627 TVNNTDREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLNSKKSSTRRWVLFED 1685
Query: 1377 YIVNTGINKI 1406
I G I
Sbjct: 1686 IITGNGYKVI 1695
Score = 24.6 bits (52), Expect(2) = 9e-97
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 1409 EHIAGTKNNIADQLSR 1456
EHI G NN+ D LSR
Sbjct: 1697 EHIKGKDNNLPDMLSR 1712
>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 730
Score = 358 bits (918), Expect(2) = 9e-97
Identities = 182/370 (49%), Positives = 239/370 (64%), Gaps = 10/370 (2%)
Frame = +3
Query: 327 LNNHSEQIRGKPRMVINYKRLNDNIENDGYKIPTKDQLLNSIQKCTIFSKFDCKSGFWQV 506
+ NH+E++RGK RMVINYKRLNDN D Y IP K + +N IQ FSKFD K+GFWQV
Sbjct: 161 VRNHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQV 220
Query: 507 KMHPDSIHWTAFSCPEGHFEWLVMPFGVKIAPSVFQRKMDTIFLKHSKFVIAYIDDILVF 686
KM +SI WTAF+CP+GH+EWLVMP G+K AP++FQRKM IF ++ +F++ YIDD+LVF
Sbjct: 221 KMAEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVF 280
Query: 687 SKNLKEHYGHLHIVLNEFRNNGIIIS-------KPVITFLGSILGNGTIQLSPHISKTVL 845
S+ KEH HL I + NG+I+S K I FLG +G G I L HI+K +L
Sbjct: 281 SRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKIL 340
Query: 846 NKPDKLETLKDIQSFLGLANQARPYVKDLNKLLAPLYQKTSKNGQRFFNSEDIKLVQKIK 1025
PD + K +Q FLGL N AR Y+ +L KL PLY K KN QR+FNSEDIKLV+ IK
Sbjct: 341 QFPDAMNDKKKLQQFLGLVNYARNYINNLAKLAGPLYAKLRKNSQRYFNSEDIKLVRLIK 400
Query: 1026 QVLQNXXXXXXXXXXXXXIIQCDGCITGWGAILSKKPHKYSPKTEEKICRYGSGKFKVTE 1205
+ ++ II+ D GWGAIL ++P K+S K+EEKICRY SG +K+ +
Sbjct: 401 EKVKELKPLELPLEESYFIIETDASQYGWGAILKQRPTKFSAKSEEKICRYASGSYKL-K 459
Query: 1206 NIPSLDCEILAVIYSMNHFRLLIIDKPEITIRTDCENIVKF---MKHKTLSRKRWLTFID 1376
+ + D EI+A+I ++N FRL + K E T+RTDCE I ++ + K S +RW+ F D
Sbjct: 460 TVNNTDREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLNSKKSSTRRWVLFED 518
Query: 1377 YIVNTGINKI 1406
I G I
Sbjct: 519 IITGNGYKVI 528
Score = 24.6 bits (52), Expect(2) = 9e-97
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 1409 EHIAGTKNNIADQLSR 1456
EHI G NN+ D LSR
Sbjct: 530 EHIKGKDNNLPDMLSR 545
>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
gi|116310779|emb|CAH67571.1| H0315A08.1 [Oryza sativa
Indica Group]
Length = 685
Score = 353 bits (907), Expect(2) = 2e-95
Identities = 180/370 (48%), Positives = 240/370 (64%), Gaps = 10/370 (2%)
Frame = +3
Query: 327 LNNHSEQIRGKPRMVINYKRLNDNIENDGYKIPTKDQLLNSIQKCTIFSKFDCKSGFWQV 506
+ NH+E++RGK RMVINYKRLN+N D Y IP K + +N IQ FSKFD K+GFWQV
Sbjct: 223 VRNHAEEVRGKSRMVINYKRLNNNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQV 282
Query: 507 KMHPDSIHWTAFSCPEGHFEWLVMPFGVKIAPSVFQRKMDTIFLKHSKFVIAYIDDILVF 686
KM +SI WTAF+CP+GH+EWLVMP G+K AP++FQRKM IF ++ +F++ YIDD+LVF
Sbjct: 283 KMAEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVF 342
Query: 687 SKNLKEHYGHLHIVLNEFRNNGIIIS-------KPVITFLGSILGNGTIQLSPHISKTVL 845
S+ KEH HL I + + NG+I+S K I FLG +G G I L HI+K +L
Sbjct: 343 SRTYKEHIAHLEIFIRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKIL 402
Query: 846 NKPDKLETLKDIQSFLGLANQARPYVKDLNKLLAPLYQKTSKNGQRFFNSEDIKLVQKIK 1025
PD + K +Q FLGL N AR ++ +L KL PLY K KNGQR+FNSEDIKLV+ IK
Sbjct: 403 QFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIKLVRLIK 462
Query: 1026 QVLQNXXXXXXXXXXXXXIIQCDGCITGWGAILSKKPHKYSPKTEEKICRYGSGKFKVTE 1205
+ ++ II+ D GWGAIL ++P K+S K+EEKICRY SG +K+ +
Sbjct: 463 ERVKELKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASGSYKL-K 521
Query: 1206 NIPSLDCEILAVIYSMNHFRLLIIDKPEITIRTDCENIVKF---MKHKTLSRKRWLTFID 1376
+ + D EI+A+I ++N FRL + K E T+ TDCE I ++ + K S +RW+ F D
Sbjct: 522 TVNNTDREIMAIINAINAFRLYLGFK-EFTVITDCEAICRYYNQLNSKKSSTRRWVLFED 580
Query: 1377 YIVNTGINKI 1406
I G I
Sbjct: 581 IITGNGYKVI 590
Score = 24.6 bits (52), Expect(2) = 2e-95
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 1409 EHIAGTKNNIADQLSR 1456
EHI G NN+ D LSR
Sbjct: 592 EHIKGKDNNLPDMLSR 607
>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 792
Score = 355 bits (911), Expect(2) = 2e-95
Identities = 179/370 (48%), Positives = 239/370 (64%), Gaps = 10/370 (2%)
Frame = +3
Query: 327 LNNHSEQIRGKPRMVINYKRLNDNIENDGYKIPTKDQLLNSIQKCTIFSKFDCKSGFWQV 506
+ NH+E++RGK RMVINYKRLNDN D Y IP K + +N IQ FSKFD K+GFWQV
Sbjct: 223 VRNHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQV 282
Query: 507 KMHPDSIHWTAFSCPEGHFEWLVMPFGVKIAPSVFQRKMDTIFLKHSKFVIAYIDDILVF 686
KM +SI WTAF+CP+GH+EWLVMP G+K AP++FQRKM IF + +FV+ YIDD+L+F
Sbjct: 283 KMAEESIEWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIF 342
Query: 687 SKNLKEHYGHLHIVLNEFRNNGIIIS-------KPVITFLGSILGNGTIQLSPHISKTVL 845
SK K+H HL + + NG+I+S K + FLG +G G I L HI+K +L
Sbjct: 343 SKTYKDHIAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGEGKIHLQEHIAKKIL 402
Query: 846 NKPDKLETLKDIQSFLGLANQARPYVKDLNKLLAPLYQKTSKNGQRFFNSEDIKLVQKIK 1025
PD + K +Q FLGL N AR ++ +L KL PLY K KNGQ++FNSEDIKLV+ IK
Sbjct: 403 QFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQKYFNSEDIKLVRLIK 462
Query: 1026 QVLQNXXXXXXXXXXXXXIIQCDGCITGWGAILSKKPHKYSPKTEEKICRYGSGKFKVTE 1205
+ ++ II+ D GWGAIL ++P K+S K+EEKICRY SG +K+ +
Sbjct: 463 EKVKELKPLELPLEESYFIIETDASQQGWGAILKQRPTKFSAKSEEKICRYASGSYKL-K 521
Query: 1206 NIPSLDCEILAVIYSMNHFRLLIIDKPEITIRTDCENIVKF---MKHKTLSRKRWLTFID 1376
+ + D EI+A+I ++N FRL + K E T+RTDCE I ++ + K S +RW+ F D
Sbjct: 522 TVNNTDREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLNSKKSSTRRWILFED 580
Query: 1377 YIVNTGINKI 1406
I G I
Sbjct: 581 IITGNGYRVI 590
Score = 22.7 bits (47), Expect(2) = 2e-95
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 1409 EHIAGTKNNIADQLSR 1456
EHI G N++ D LSR
Sbjct: 592 EHIKGKDNSLPDMLSR 607