BLASTX nr result

ID: Panax21_contig00025016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025016
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|2...   182   7e-44
ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|2...   176   4e-42
ref|XP_004163775.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   150   3e-34
ref|XP_004145778.1| PREDICTED: uncharacterized protein LOC101203...   150   3e-34
ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251...   148   8e-34

>ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|222861034|gb|EEE98576.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  182 bits (461), Expect = 7e-44
 Identities = 82/127 (64%), Positives = 97/127 (76%)
 Frame = +3

Query: 9   EVSDGLGAINVVNVDHWDCSCGMWQVTGIPCLHAVAAVEHNNGNICDYCSKYFTTETFRL 188
           EV D LGA+NVVN+D WDCSC  WQ+ G PCLHAVA ++H   ++ DYCSKY+TTE FRL
Sbjct: 447 EVQDFLGAVNVVNIDAWDCSCREWQLNGFPCLHAVAVLQHIGRDVYDYCSKYYTTEAFRL 506

Query: 189 TYLDSINPLPTADMPVHKNSSPVQVHPPVLHRSPGLPKKRRIRSKGVLKRPLHCSRCKGV 368
           TY +SI P+PT D PV   SS VQV+P  L    G PKKRRIRS+GV+KRPLHCSRCKG 
Sbjct: 507 TYSESIKPVPTVDKPVLGESSEVQVNPSPLRCVSGSPKKRRIRSRGVVKRPLHCSRCKGE 566

Query: 369 GHNRATC 389
           GHN+ +C
Sbjct: 567 GHNKVSC 573


>ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|222844529|gb|EEE82076.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  176 bits (446), Expect = 4e-42
 Identities = 78/127 (61%), Positives = 95/127 (74%)
 Frame = +3

Query: 9   EVSDGLGAINVVNVDHWDCSCGMWQVTGIPCLHAVAAVEHNNGNICDYCSKYFTTETFRL 188
           EV D LGA+NVVN+D WDCSC  WQ+ G PC HAVA ++H   ++ DYCSK++TTE +RL
Sbjct: 447 EVQDFLGAVNVVNIDAWDCSCREWQLNGFPCSHAVAVLQHIGRDVYDYCSKFYTTEAYRL 506

Query: 189 TYLDSINPLPTADMPVHKNSSPVQVHPPVLHRSPGLPKKRRIRSKGVLKRPLHCSRCKGV 368
           TY +SI P+PT D P  +  S VQV P  L R  G PKKRRIRS+GV+KRPLHCSRCKG 
Sbjct: 507 TYSESIKPVPTVDKPAPQELSEVQVLPSPLRRISGSPKKRRIRSRGVVKRPLHCSRCKGE 566

Query: 369 GHNRATC 389
           GHN+ +C
Sbjct: 567 GHNKVSC 573


>ref|XP_004163775.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203656 [Cucumis
            sativus]
          Length = 770

 Score =  150 bits (378), Expect = 3e-34
 Identities = 65/122 (53%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
 Frame = +3

Query: 30   AINVVNVDHWDCSCGMWQVTGIPCLHAVAAVEHNNGNICDYCSKYFTTETFRLTYLDSIN 209
            +I VV+VDHWDC+C  WQ+TG+PC HA+A +     +  D+CS+YFTTE++RLTY DS++
Sbjct: 642  SIEVVDVDHWDCTCKGWQLTGLPCSHAIAVLSCLGRSPFDFCSRYFTTESYRLTYSDSVH 701

Query: 210  PLPTADMPVHKNS--SPVQVHPPVLHRSPGLPKKRRIRSKGVLKRPLHCSRCKGVGHNRA 383
            P+P  D+P+HK+S  + V V PP   R PG P  +R  S  V+KR L CSRCKG+GHN++
Sbjct: 702  PVPQVDLPIHKSSLQASVTVTPPPTRRPPGRPTSKRYGSPEVMKRQLQCSRCKGLGHNKS 761

Query: 384  TC 389
            TC
Sbjct: 762  TC 763


>ref|XP_004145778.1| PREDICTED: uncharacterized protein LOC101203656 [Cucumis sativus]
          Length = 770

 Score =  150 bits (378), Expect = 3e-34
 Identities = 65/122 (53%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
 Frame = +3

Query: 30   AINVVNVDHWDCSCGMWQVTGIPCLHAVAAVEHNNGNICDYCSKYFTTETFRLTYLDSIN 209
            +I VV+VDHWDC+C  WQ+TG+PC HA+A +     +  D+CS+YFTTE++RLTY DS++
Sbjct: 642  SIEVVDVDHWDCTCKGWQLTGLPCSHAIAVLSCLGRSPFDFCSRYFTTESYRLTYSDSVH 701

Query: 210  PLPTADMPVHKNS--SPVQVHPPVLHRSPGLPKKRRIRSKGVLKRPLHCSRCKGVGHNRA 383
            P+P  D+P+HK+S  + V V PP   R PG P  +R  S  V+KR L CSRCKG+GHN++
Sbjct: 702  PVPQVDLPIHKSSLQASVTVTPPPTRRPPGRPTSKRYGSPEVMKRQLQCSRCKGLGHNKS 761

Query: 384  TC 389
            TC
Sbjct: 762  TC 763


>ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251030 [Vitis vinifera]
          Length = 768

 Score =  148 bits (374), Expect = 8e-34
 Identities = 65/121 (53%), Positives = 87/121 (71%), Gaps = 2/121 (1%)
 Frame = +3

Query: 33   INVVNVDHWDCSCGMWQVTGIPCLHAVAAVEHNNGNICDYCSKYFTTETFRLTYLDSINP 212
            I VV++DHWDCSC  WQ+TG+PC HA+A +     +  +YCS+YFTTE++RLTY +S++P
Sbjct: 644  IEVVDIDHWDCSCKGWQLTGLPCCHAIAVISCIGQSPYEYCSRYFTTESYRLTYSESVHP 703

Query: 213  LPTADMPVHKNSS--PVQVHPPVLHRSPGLPKKRRIRSKGVLKRPLHCSRCKGVGHNRAT 386
            +P  D P+ K+SS   V V PP   R PG P  +R  S+ V+KR L CSRCKGVGHN++T
Sbjct: 704  IPNVDRPMEKDSSLVAVTVTPPPTRRPPGRPTTKRFGSQEVVKRQLQCSRCKGVGHNKST 763

Query: 387  C 389
            C
Sbjct: 764  C 764


Top