BLASTX nr result
ID: Panax21_contig00025005
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00025005 (352 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFY26900.1| dynein light chain [Morella rubra] 117 8e-25 ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1... 112 4e-23 ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic... 111 5e-23 ref|XP_002516948.1| cytoplasmic dynein light chain, putative [Ri... 109 2e-22 ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagell... 109 2e-22 >gb|AFY26900.1| dynein light chain [Morella rubra] Length = 125 Score = 117 bits (294), Expect = 8e-25 Identities = 60/92 (65%), Positives = 70/92 (76%), Gaps = 8/92 (8%) Frame = +3 Query: 99 MSEEAKRIGAGALVVK----DDRKPSSAVSP----PSAGKKVIIKSADMKDDMQMEAVDI 254 MSE+AKR G L+VK DDRKPS+A P P +GK+VIIKSADM DMQ EA+D Sbjct: 1 MSEDAKRAIQGGLMVKPPSSDDRKPSAAAGPRPATPPSGKRVIIKSADMLPDMQKEAIDT 60 Query: 255 AVGAFEKHGVEKDVAEHIKKEFDKKYGPTWHC 350 A+ AFEKH VEKDVAEHIKKEFD+++G TWHC Sbjct: 61 AIAAFEKHSVEKDVAEHIKKEFDQRHGSTWHC 92 >ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1| unknown [Populus trichocarpa] gi|222838609|gb|EEE76974.1| predicted protein [Populus trichocarpa] Length = 120 Score = 112 bits (279), Expect = 4e-23 Identities = 57/86 (66%), Positives = 68/86 (79%), Gaps = 3/86 (3%) Frame = +3 Query: 102 SEEAKRIGAGALVVKDD---RKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAFE 272 SE+ KR G + V++D RK S A + P GKK+IIK+ADMKDDMQ EAVDIA+ AFE Sbjct: 3 SEDMKRSITGGVKVENDSYYRKSSPAAAAPP-GKKIIIKNADMKDDMQKEAVDIAIAAFE 61 Query: 273 KHGVEKDVAEHIKKEFDKKYGPTWHC 350 ++ VEKDVAEHIKKEFDKK+GPTWHC Sbjct: 62 RNNVEKDVAEHIKKEFDKKHGPTWHC 87 >ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max] Length = 157 Score = 111 bits (278), Expect = 5e-23 Identities = 61/89 (68%), Positives = 68/89 (76%), Gaps = 5/89 (5%) Frame = +3 Query: 99 MSEEAKRIGAGALVVK---DDRKPSSAVSPPSA--GKKVIIKSADMKDDMQMEAVDIAVG 263 MSE+AK+ AGAL + DD+KPS SP A KKVIIKSADM DMQ EAVDIAV Sbjct: 36 MSEDAKKNIAGALTARPNSDDQKPSPLPSPAPAVPPKKVIIKSADMIPDMQKEAVDIAVA 95 Query: 264 AFEKHGVEKDVAEHIKKEFDKKYGPTWHC 350 AFEK+ VEKDVAE IKKEFDK++GPTWHC Sbjct: 96 AFEKYNVEKDVAEQIKKEFDKRHGPTWHC 124 >ref|XP_002516948.1| cytoplasmic dynein light chain, putative [Ricinus communis] gi|223544036|gb|EEF45562.1| cytoplasmic dynein light chain, putative [Ricinus communis] Length = 126 Score = 109 bits (273), Expect = 2e-22 Identities = 59/86 (68%), Positives = 69/86 (80%), Gaps = 3/86 (3%) Frame = +3 Query: 102 SEEAKRIGAGALVVK---DDRKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAFE 272 +EEAKR G LV K DD K S A +PP+A KK+IIK+ADMK DMQ EAVDIA+ AFE Sbjct: 3 TEEAKRSIIGGLVTKPISDDPKVSPA-TPPTA-KKIIIKNADMKVDMQKEAVDIAIAAFE 60 Query: 273 KHGVEKDVAEHIKKEFDKKYGPTWHC 350 K+ VEKDVAEHIKKEFD+++GPTWHC Sbjct: 61 KNNVEKDVAEHIKKEFDRRHGPTWHC 86 >ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagellar outer arm [Vitis vinifera] gi|147857576|emb|CAN81003.1| hypothetical protein VITISV_006994 [Vitis vinifera] Length = 117 Score = 109 bits (273), Expect = 2e-22 Identities = 58/87 (66%), Positives = 68/87 (78%), Gaps = 3/87 (3%) Frame = +3 Query: 99 MSEEAKRIGAGALVVK---DDRKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAF 269 M+E+ KR GA AL +K DDRK S A S A K+VIIKSADMKDDMQ EA+DIA+ A Sbjct: 1 MAEDLKRNGALALSLKQSSDDRKLSLAAS---ASKRVIIKSADMKDDMQKEAIDIAIAAS 57 Query: 270 EKHGVEKDVAEHIKKEFDKKYGPTWHC 350 E H VEK++AE+IKKEFDKK+GPTWHC Sbjct: 58 ENHSVEKNIAEYIKKEFDKKHGPTWHC 84