BLASTX nr result

ID: Panax21_contig00025005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025005
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY26900.1| dynein light chain [Morella rubra]                     117   8e-25
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   112   4e-23
ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic...   111   5e-23
ref|XP_002516948.1| cytoplasmic dynein light chain, putative [Ri...   109   2e-22
ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagell...   109   2e-22

>gb|AFY26900.1| dynein light chain [Morella rubra]
          Length = 125

 Score =  117 bits (294), Expect = 8e-25
 Identities = 60/92 (65%), Positives = 70/92 (76%), Gaps = 8/92 (8%)
 Frame = +3

Query: 99  MSEEAKRIGAGALVVK----DDRKPSSAVSP----PSAGKKVIIKSADMKDDMQMEAVDI 254
           MSE+AKR   G L+VK    DDRKPS+A  P    P +GK+VIIKSADM  DMQ EA+D 
Sbjct: 1   MSEDAKRAIQGGLMVKPPSSDDRKPSAAAGPRPATPPSGKRVIIKSADMLPDMQKEAIDT 60

Query: 255 AVGAFEKHGVEKDVAEHIKKEFDKKYGPTWHC 350
           A+ AFEKH VEKDVAEHIKKEFD+++G TWHC
Sbjct: 61  AIAAFEKHSVEKDVAEHIKKEFDQRHGSTWHC 92


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/86 (66%), Positives = 68/86 (79%), Gaps = 3/86 (3%)
 Frame = +3

Query: 102 SEEAKRIGAGALVVKDD---RKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAFE 272
           SE+ KR   G + V++D   RK S A + P  GKK+IIK+ADMKDDMQ EAVDIA+ AFE
Sbjct: 3   SEDMKRSITGGVKVENDSYYRKSSPAAAAPP-GKKIIIKNADMKDDMQKEAVDIAIAAFE 61

Query: 273 KHGVEKDVAEHIKKEFDKKYGPTWHC 350
           ++ VEKDVAEHIKKEFDKK+GPTWHC
Sbjct: 62  RNNVEKDVAEHIKKEFDKKHGPTWHC 87


>ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 157

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/89 (68%), Positives = 68/89 (76%), Gaps = 5/89 (5%)
 Frame = +3

Query: 99  MSEEAKRIGAGALVVK---DDRKPSSAVSPPSA--GKKVIIKSADMKDDMQMEAVDIAVG 263
           MSE+AK+  AGAL  +   DD+KPS   SP  A   KKVIIKSADM  DMQ EAVDIAV 
Sbjct: 36  MSEDAKKNIAGALTARPNSDDQKPSPLPSPAPAVPPKKVIIKSADMIPDMQKEAVDIAVA 95

Query: 264 AFEKHGVEKDVAEHIKKEFDKKYGPTWHC 350
           AFEK+ VEKDVAE IKKEFDK++GPTWHC
Sbjct: 96  AFEKYNVEKDVAEQIKKEFDKRHGPTWHC 124


>ref|XP_002516948.1| cytoplasmic dynein light chain, putative [Ricinus communis]
           gi|223544036|gb|EEF45562.1| cytoplasmic dynein light
           chain, putative [Ricinus communis]
          Length = 126

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/86 (68%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
 Frame = +3

Query: 102 SEEAKRIGAGALVVK---DDRKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAFE 272
           +EEAKR   G LV K   DD K S A +PP+A KK+IIK+ADMK DMQ EAVDIA+ AFE
Sbjct: 3   TEEAKRSIIGGLVTKPISDDPKVSPA-TPPTA-KKIIIKNADMKVDMQKEAVDIAIAAFE 60

Query: 273 KHGVEKDVAEHIKKEFDKKYGPTWHC 350
           K+ VEKDVAEHIKKEFD+++GPTWHC
Sbjct: 61  KNNVEKDVAEHIKKEFDRRHGPTWHC 86


>ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagellar outer arm [Vitis
           vinifera] gi|147857576|emb|CAN81003.1| hypothetical
           protein VITISV_006994 [Vitis vinifera]
          Length = 117

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/87 (66%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
 Frame = +3

Query: 99  MSEEAKRIGAGALVVK---DDRKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAF 269
           M+E+ KR GA AL +K   DDRK S A S   A K+VIIKSADMKDDMQ EA+DIA+ A 
Sbjct: 1   MAEDLKRNGALALSLKQSSDDRKLSLAAS---ASKRVIIKSADMKDDMQKEAIDIAIAAS 57

Query: 270 EKHGVEKDVAEHIKKEFDKKYGPTWHC 350
           E H VEK++AE+IKKEFDKK+GPTWHC
Sbjct: 58  ENHSVEKNIAEYIKKEFDKKHGPTWHC 84


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