BLASTX nr result

ID: Panax21_contig00024499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024499
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321228.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
gb|ABK92675.1| unknown [Populus trichocarpa]                          150   8e-35
emb|CBI35754.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002524581.1| ribonuclease t2, putative [Ricinus communis]...   137   9e-31
gb|AFK35006.1| unknown [Lotus japonicus]                              134   6e-30

>ref|XP_002321228.1| predicted protein [Populus trichocarpa] gi|222862001|gb|EEE99543.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/100 (75%), Positives = 82/100 (82%)
 Frame = +3

Query: 3   EAGYVPSNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGPSS 182
           EAGYVPSNSEKYPLGGIVSAI+NAFHATP+L CSKG +EELRLCFYKDFKPRDC I    
Sbjct: 169 EAGYVPSNSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCVI---- 224

Query: 183 SQSDMISSKNSCPKYVSLPERVSLGLKNVETPGSWLPRNE 302
            Q+DM +SK+SCPKYVSLP  VSLGL    T  SW+P NE
Sbjct: 225 -QNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEVSWVPDNE 263


>gb|ABK92675.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/100 (74%), Positives = 81/100 (81%)
 Frame = +3

Query: 3   EAGYVPSNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGPSS 182
           EAGYVPSNSEKYPLGGIVSAI+NAFHATP+L CSKG +EELRLCFYKDFKPRDC I    
Sbjct: 169 EAGYVPSNSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCVI---- 224

Query: 183 SQSDMISSKNSCPKYVSLPERVSLGLKNVETPGSWLPRNE 302
            Q+DM +SK+SCPKYVSLP  VSLGL    T   W+P NE
Sbjct: 225 -QNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEVPWVPDNE 263


>emb|CBI35754.3| unnamed protein product [Vitis vinifera]
          Length = 104

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/100 (73%), Positives = 83/100 (83%)
 Frame = +3

Query: 3   EAGYVPSNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGPSS 182
           EAGYVPSNSEKYPLGGIVSAI+NAFHATP L+CS GAV+EL LCF KDFKPRDCA+  SS
Sbjct: 5   EAGYVPSNSEKYPLGGIVSAIENAFHATPSLACSNGAVKELYLCFNKDFKPRDCAV-RSS 63

Query: 183 SQSDMISSKNSCPKYVSLPERVSLGLKNVETPGSWLPRNE 302
            QS+ I S++SCP YVSLP  VSLGL++  T  +WLP NE
Sbjct: 64  LQSE-IFSQSSCPTYVSLPAHVSLGLEDDRTAVAWLPDNE 102


>ref|XP_002524581.1| ribonuclease t2, putative [Ricinus communis]
           gi|223536134|gb|EEF37789.1| ribonuclease t2, putative
           [Ricinus communis]
          Length = 259

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/90 (74%), Positives = 75/90 (83%)
 Frame = +3

Query: 3   EAGYVPSNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGPSS 182
           EAGYVPSN+EKYPLGGI+SAI+NAFHATP LSCS+GAVEEL LCFYKDFKPR+CA+G  S
Sbjct: 168 EAGYVPSNTEKYPLGGIISAIENAFHATPSLSCSRGAVEELYLCFYKDFKPRNCAVG--S 225

Query: 183 SQSDMISSKNSCPKYVSLPERVSLGLKNVE 272
              D  SSK+SCPK+VSLP  VS GL   E
Sbjct: 226 IIQDNFSSKSSCPKFVSLPAYVSSGLDGAE 255


>gb|AFK35006.1| unknown [Lotus japonicus]
          Length = 279

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/101 (66%), Positives = 79/101 (78%)
 Frame = +3

Query: 3   EAGYVPSNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGPSS 182
           EAGYVPSN+EKYPLGGIVSAI+NAFH +P + CSKG+VEELRLCFY DFKPRDCA+G   
Sbjct: 179 EAGYVPSNTEKYPLGGIVSAIENAFHMSPLIICSKGSVEELRLCFYNDFKPRDCAVG-QD 237

Query: 183 SQSDMISSKNSCPKYVSLPERVSLGLKNVETPGSWLPRNEA 305
            ++DM+ SK SCPKYVSLPE  SLG    +   SW+  + A
Sbjct: 238 IKTDMV-SKGSCPKYVSLPEHASLGGPGRDGLQSWVSDDAA 277


Top