BLASTX nr result

ID: Panax21_contig00024498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024498
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321228.1| predicted protein [Populus trichocarpa] gi|2...   364   2e-98
gb|ABK92675.1| unknown [Populus trichocarpa]                          363   3e-98
gb|ACR19180.1| S-like RNase [Citrus maxima]                           349   5e-94
ref|XP_004161534.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease...   343   3e-92
gb|ACY00699.1| S-like RNase [Citrus maxima]                           343   3e-92

>ref|XP_002321228.1| predicted protein [Populus trichocarpa] gi|222862001|gb|EEE99543.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  364 bits (934), Expect = 2e-98
 Identities = 176/253 (69%), Positives = 194/253 (76%)
 Frame = +3

Query: 33  MVSLLTGTILSLQILVLLIGSFCIVDINGGGFDIFKGQREFDYFKLSLQWPGTVCRGTRH 212
           M SL   T+L L  LV +  S+C+++         +GQREFDYF LSLQWPGT CR TRH
Sbjct: 1   MASLSVQTLLVL--LVFVTASYCMIEEASA----IEGQREFDYFALSLQWPGTYCRHTRH 54

Query: 213 XXXXXXXXXXXXXPREFTIHGLWPDYNDGTWPACCAKSDFDVKEITTLRDALEKYWASYS 392
                        P EFTIHGLWPDYNDGTWPACC +SDF+ KEI+TL DALEKYW S S
Sbjct: 55  CCSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLS 114

Query: 393 CSLTSTCSGKKGLFWAHEWEKHGTCSSPVVKDEYSYFLTTLNVYFKYNVTEVLNEAGYVP 572
           C   S+C G KG FWAHEWEKHGTCSSPVV DEYSYF TTLNVYFKYNVT+VLNEAGYVP
Sbjct: 115 CGSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVP 174

Query: 573 SNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGASSSQSDTI 752
           SNSEKYPLGGIVSAI+NAFHATP+L CSKG +EELRLCFYKDFKPRDC I     Q+D  
Sbjct: 175 SNSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCVI-----QNDMY 229

Query: 753 SSKNSCPKYVSLP 791
           +SK+SCPKYVSLP
Sbjct: 230 TSKSSCPKYVSLP 242


>gb|ABK92675.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  363 bits (933), Expect = 3e-98
 Identities = 176/253 (69%), Positives = 194/253 (76%)
 Frame = +3

Query: 33  MVSLLTGTILSLQILVLLIGSFCIVDINGGGFDIFKGQREFDYFKLSLQWPGTVCRGTRH 212
           M SL   T+L L  LV +  S+C+++         +GQREFDYF LSLQWPGT CR TRH
Sbjct: 1   MASLSVQTLLVL--LVFVTASYCMIEEASA----IEGQREFDYFALSLQWPGTYCRHTRH 54

Query: 213 XXXXXXXXXXXXXPREFTIHGLWPDYNDGTWPACCAKSDFDVKEITTLRDALEKYWASYS 392
                        P EFTIHGLWPDYNDGTWPACC +SDF+ KEI+TL DALEKYW S S
Sbjct: 55  CCSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNGKEISTLHDALEKYWPSLS 114

Query: 393 CSLTSTCSGKKGLFWAHEWEKHGTCSSPVVKDEYSYFLTTLNVYFKYNVTEVLNEAGYVP 572
           C   S+C G KG FWAHEWEKHGTCSSPVV DEYSYF TTLNVYFKYNVT+VLNEAGYVP
Sbjct: 115 CGSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVP 174

Query: 573 SNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGASSSQSDTI 752
           SNSEKYPLGGIVSAI+NAFHATP+L CSKG +EELRLCFYKDFKPRDC I     Q+D  
Sbjct: 175 SNSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCVI-----QNDMY 229

Query: 753 SSKNSCPKYVSLP 791
           +SK+SCPKYVSLP
Sbjct: 230 TSKSSCPKYVSLP 242


>gb|ACR19180.1| S-like RNase [Citrus maxima]
          Length = 278

 Score =  349 bits (896), Expect = 5e-94
 Identities = 165/243 (67%), Positives = 182/243 (74%), Gaps = 3/243 (1%)
 Frame = +3

Query: 72  ILVLLIGSFC---IVDINGGGFDIFKGQREFDYFKLSLQWPGTVCRGTRHXXXXXXXXXX 242
           + VLL  SFC    + +     D    QREFDYF  +LQWPGT C+ TRH          
Sbjct: 14  VAVLLTASFCQLKAIGVREAVDDAVGEQREFDYFNFALQWPGTQCKNTRHCCPSNGCCRG 73

Query: 243 XXXPREFTIHGLWPDYNDGTWPACCAKSDFDVKEITTLRDALEKYWASYSCSLTSTCSGK 422
              P EFTIHGLWPDYNDGTWP+CC KS FD KEI+TL DALEKYW SY C  TSTC   
Sbjct: 74  SNAPTEFTIHGLWPDYNDGTWPSCCKKSKFDEKEISTLLDALEKYWPSYRCGSTSTCYSG 133

Query: 423 KGLFWAHEWEKHGTCSSPVVKDEYSYFLTTLNVYFKYNVTEVLNEAGYVPSNSEKYPLGG 602
           +GLFWAHEWEKHGTCS PVV+DEYSYF TTLN+YFKYNVT VLNEAGY+PSN+EKYPLGG
Sbjct: 134 EGLFWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGG 193

Query: 603 IVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGASSSQSDTISSKNSCPKYV 782
           IVSAIQNAFHATP+L CSKGAV EL LCFYKDFKPRDC I   S ++D   S +SCPK+V
Sbjct: 194 IVSAIQNAFHATPKLDCSKGAVNELHLCFYKDFKPRDCII-ERSPENDNYFSSSSCPKFV 252

Query: 783 SLP 791
           SLP
Sbjct: 253 SLP 255


>ref|XP_004161534.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 2-like [Cucumis
           sativus]
          Length = 275

 Score =  343 bits (881), Expect = 3e-92
 Identities = 159/216 (73%), Positives = 173/216 (80%)
 Frame = +3

Query: 144 QREFDYFKLSLQWPGTVCRGTRHXXXXXXXXXXXXXPREFTIHGLWPDYNDGTWPACCAK 323
           QREFDYFKL+LQWPGTVC+GTRH               +FTIHGLWPDYNDGTWPACC  
Sbjct: 41  QREFDYFKLALQWPGTVCKGTRHCCSSNGCCNRSGAFADFTIHGLWPDYNDGTWPACCNX 100

Query: 324 SDFDVKEITTLRDALEKYWASYSCSLTSTCSGKKGLFWAHEWEKHGTCSSPVVKDEYSYF 503
            +FD KEI TL D L+KYW S SCS  STC G KG FWAHEWEKHGTCS PV  DEY+YF
Sbjct: 101 KNFDEKEILTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHEWEKHGTCSYPVAHDEYNYF 160

Query: 504 LTTLNVYFKYNVTEVLNEAGYVPSNSEKYPLGGIVSAIQNAFHATPELSCSKGAVEELRL 683
           LTTLNVYFKYNVT+VLN+AGY+PSN+EKYPLGGI+SAIQNAFHATP   C KGAVEEL L
Sbjct: 161 LTTLNVYFKYNVTKVLNDAGYLPSNTEKYPLGGIISAIQNAFHATPSFGCKKGAVEELYL 220

Query: 684 CFYKDFKPRDCAIGASSSQSDTISSKNSCPKYVSLP 791
           CFYKDFKPRDCA   S SQ+  ISS++SCPKYVSLP
Sbjct: 221 CFYKDFKPRDCA--ESHSQNGIISSRSSCPKYVSLP 254


>gb|ACY00699.1| S-like RNase [Citrus maxima]
          Length = 278

 Score =  343 bits (881), Expect = 3e-92
 Identities = 165/243 (67%), Positives = 181/243 (74%), Gaps = 3/243 (1%)
 Frame = +3

Query: 72  ILVLLIGSFC---IVDINGGGFDIFKGQREFDYFKLSLQWPGTVCRGTRHXXXXXXXXXX 242
           + VLL  SFC    + I     D    QREFDYF  +LQWPGT C+ TRH          
Sbjct: 14  VAVLLTASFCQLKAIGIREAVDDAVGEQREFDYFNFALQWPGTQCKNTRHCCPSNGCCRG 73

Query: 243 XXXPREFTIHGLWPDYNDGTWPACCAKSDFDVKEITTLRDALEKYWASYSCSLTSTCSGK 422
              P EFTIHGLWPDYNDGTWP+CC KS FD KEI+TL DALEKYW SY C  TSTC   
Sbjct: 74  SNAPTEFTIHGLWPDYNDGTWPSCCKKSKFDEKEISTLLDALEKYWPSYRCGSTSTCYSG 133

Query: 423 KGLFWAHEWEKHGTCSSPVVKDEYSYFLTTLNVYFKYNVTEVLNEAGYVPSNSEKYPLGG 602
           +GLFWAHE EKHGTCS PVV+DEYSYF TTLN+YFKYNVT VLNEAGY+PSN+EKYPLGG
Sbjct: 134 EGLFWAHEVEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGG 193

Query: 603 IVSAIQNAFHATPELSCSKGAVEELRLCFYKDFKPRDCAIGASSSQSDTISSKNSCPKYV 782
           IVSAIQNAFHATP+L CSK AV ELRLCFYKDFKPRDC I   S ++D   S +SCPK+V
Sbjct: 194 IVSAIQNAFHATPKLDCSKDAVNELRLCFYKDFKPRDCII-ERSPENDNYFSSSSCPKFV 252

Query: 783 SLP 791
           SLP
Sbjct: 253 SLP 255


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