BLASTX nr result

ID: Panax21_contig00024487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024487
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin respon...   166   2e-39
emb|CBI19090.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_002513844.1| Auxin response factor, putative [Ricinus com...   156   2e-36
emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]   150   1e-34
ref|XP_002307409.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
           [Vitis vinifera]
          Length = 593

 Score =  166 bits (421), Expect = 2e-39
 Identities = 92/185 (49%), Positives = 116/185 (62%)
 Frame = +2

Query: 2   KKCRVPQXXXXXXXXXXEPLFPMTGLNNSMVSHLNPSLMNSNSFPASIQGARQDRIFVSS 181
           K+ R+ Q          E  FPM    ++++  LNPSL+N N+FPA +QGARQD  +VSS
Sbjct: 389 KRFRIAQSPELPSDGEGEIFFPMA---DTVMGILNPSLLNHNTFPAGMQGARQDSFYVSS 445

Query: 182 LSSFIRENTHQRCSDYFNGNMSPMVETVSTELNIGSSQLDNLSPDSQSSVHFFGNELVRK 361
           LS+   ENTHQ C+     +M+  + TVSTELNIGSS  DNLSPDSQ SVHFFG + V  
Sbjct: 446 LSNLTSENTHQMCTINSLDDMATKLNTVSTELNIGSSLSDNLSPDSQGSVHFFGTKPVGN 505

Query: 362 RVRNASPKVGITSFRLFGKIIHLKKPVEDGFDDVGCPEDDGSKVYKEREGADNPVDRSST 541
           +  N+S KVGI SF+LFGK+IH+K+PVE      GC ED   K Y E    +N +D S T
Sbjct: 506 QDGNSSTKVGIHSFQLFGKVIHIKQPVEGNCSADGCTEDXVVKKYNEANCVNNSLDLSLT 565

Query: 542 YPCMK 556
           Y   K
Sbjct: 566 YSYTK 570


>emb|CBI19090.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  157 bits (397), Expect = 1e-36
 Identities = 84/164 (51%), Positives = 107/164 (65%)
 Frame = +2

Query: 2   KKCRVPQXXXXXXXXXXEPLFPMTGLNNSMVSHLNPSLMNSNSFPASIQGARQDRIFVSS 181
           K+ R+ Q          E  FPM    ++++  LNPSL+N N+FPA +QGARQD  +VSS
Sbjct: 159 KRFRIAQSPELPSDGEGEIFFPMA---DTVMGILNPSLLNHNTFPAGMQGARQDSFYVSS 215

Query: 182 LSSFIRENTHQRCSDYFNGNMSPMVETVSTELNIGSSQLDNLSPDSQSSVHFFGNELVRK 361
           LS+   ENTHQ C+     +M+  + TVSTELNIGSS  DNLSPDSQ SVHFFG + V  
Sbjct: 216 LSNLTSENTHQMCTINSLDDMATKLNTVSTELNIGSSLSDNLSPDSQGSVHFFGTKPVGN 275

Query: 362 RVRNASPKVGITSFRLFGKIIHLKKPVEDGFDDVGCPEDDGSKV 493
           +  N+S KVGI SF+LFGK+IH+K+PVE      GC ED   K+
Sbjct: 276 QDGNSSTKVGIHSFQLFGKVIHIKQPVEGNCSADGCTEDGSKKI 319


>ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
           gi|223546930|gb|EEF48427.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 603

 Score =  156 bits (394), Expect = 2e-36
 Identities = 94/181 (51%), Positives = 115/181 (63%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   KKCRVPQXXXXXXXXXXEPLFPMTGLNNSMVSHLNPSLMNSNSFPASIQGARQDRIFVSS 181
           KK R P+          E  FPM+GL NS + ++N SL N +SFPA +QGARQ+   V  
Sbjct: 404 KKFRFPENSGFLTDGEGELFFPMSGLTNSTMGNINQSL-NYHSFPAGMQGARQNPFSVYG 462

Query: 182 LSSFIRENTHQRCSDYFNGN-MSPMVETVSTELNIGSSQLDNLSPDSQSSVHFFGNELVR 358
           LS+F  E+T   CSD   GN M P ++TVSTELNIGSS  +NLSPDSQSS+H    ELV 
Sbjct: 463 LSNFFSEDTSHLCSDNVFGNKMVPKLKTVSTELNIGSSPSENLSPDSQSSIHSCDTELVG 522

Query: 359 KRVRNASPKVGITSFRLFGKIIHLKKPVEDGFDDVGCPEDDGSKVYKEREGADNPVDRSS 538
               N S K GI+SF+LFGKIIH+ +PVE GF+D G  ED  SK Y E    DNP+D + 
Sbjct: 523 NPGCN-STKAGISSFQLFGKIIHMSQPVESGFEDAGYVEDYVSKRYNE----DNPLDLAL 577

Query: 539 T 541
           T
Sbjct: 578 T 578


>emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
          Length = 624

 Score =  150 bits (379), Expect = 1e-34
 Identities = 80/149 (53%), Positives = 102/149 (68%)
 Frame = +2

Query: 2   KKCRVPQXXXXXXXXXXEPLFPMTGLNNSMVSHLNPSLMNSNSFPASIQGARQDRIFVSS 181
           K+ R+ Q          E  FPM    ++++  LNPSL+N N+FPA +QGARQD  +VSS
Sbjct: 418 KRFRIAQSPELPSDGEGEIFFPMA---DTVMGILNPSLLNHNTFPAGMQGARQDSFYVSS 474

Query: 182 LSSFIRENTHQRCSDYFNGNMSPMVETVSTELNIGSSQLDNLSPDSQSSVHFFGNELVRK 361
           LS+   ENTHQ C+     +M+  + TVSTELNIGSS  DNLSPDSQ SVHFFG + V  
Sbjct: 475 LSNLTSENTHQMCTINSLDDMATKLNTVSTELNIGSSLSDNLSPDSQGSVHFFGTKPVGN 534

Query: 362 RVRNASPKVGITSFRLFGKIIHLKKPVED 448
           +  N+S KVGI SF+LFGK+IH+K+PVED
Sbjct: 535 QDGNSSTKVGIHSFQLFGKVIHIKQPVED 563


>ref|XP_002307409.1| predicted protein [Populus trichocarpa] gi|222856858|gb|EEE94405.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  140 bits (354), Expect = 1e-31
 Identities = 80/156 (51%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
 Frame = +2

Query: 53  EPLFPMTGLNNSMVSHLNPSLMNSNSFPASIQGARQDRIFVSSLSSFIRENTHQRCSD-Y 229
           E  FPM+ L NS + H N S++N ++FPA +QGARQD      LS+FI EN  Q  SD  
Sbjct: 151 ELFFPMSDLTNSTMGHTNASMLNYSTFPAGMQGARQDPFSTFGLSNFISENAPQVFSDRA 210

Query: 230 FNGNMSPMVETVSTELNIGSSQLDNLSPDSQSSVHFFGNELVRKRVRNASPKVGITSFRL 409
           F  N+ P ++ + +E+NIGS Q +NLSP+SQSS + FG   V  R  N   KVGI S +L
Sbjct: 211 FGNNLVPKMKRMPSEMNIGSLQSENLSPESQSSAYSFGIGFVGNRGFNPK-KVGINSIQL 269

Query: 410 FGKIIHLKKPVEDGFDDVGCPEDDGSKVYKEREGAD 517
           FGKIIH+ +PVE+GFDDVG   DD SK   E EG D
Sbjct: 270 FGKIIHMDQPVENGFDDVGF-MDDSSKCCNETEGVD 304


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