BLASTX nr result

ID: Panax21_contig00024474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024474
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|2...   132   8e-29
gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]      132   8e-29
ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
ref|XP_002512777.1| conserved hypothetical protein [Ricinus comm...   120   3e-25
gb|AFK46042.1| unknown [Lotus japonicus]                              117   3e-24

>ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|222846422|gb|EEE83969.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score =  132 bits (331), Expect = 8e-29
 Identities = 57/81 (70%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
 Frame = +2

Query: 98  MDCWEKIVFPVRKFCFAITSRIKARKNGAGLLKLHNDIQTCGYEDVQVMWEMLRKTESEL 277
           MD W K++FPVR+   ++++R+KARKNGA LLKLHND+QTCGYEDVQVMWE+LR++ESEL
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 278 MS---KRKQRPFWRIFVWHNH 331
           M+   KRKQRPFWR+FVW NH
Sbjct: 61  MASHPKRKQRPFWRVFVWSNH 81


>gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 92

 Score =  132 bits (331), Expect = 8e-29
 Identities = 57/81 (70%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
 Frame = +2

Query: 98  MDCWEKIVFPVRKFCFAITSRIKARKNGAGLLKLHNDIQTCGYEDVQVMWEMLRKTESEL 277
           MD W K++FPVR+   ++++R+KARKNGA LLKLHND+QTCGYEDVQVMWE+LR++ESEL
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 278 MS---KRKQRPFWRIFVWHNH 331
           M+   KRKQRPFWR+FVW NH
Sbjct: 61  MASHPKRKQRPFWRVFVWSNH 81


>ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|222841401|gb|EEE78948.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score =  124 bits (311), Expect = 2e-26
 Identities = 54/76 (71%), Positives = 69/76 (90%), Gaps = 3/76 (3%)
 Frame = +2

Query: 113 KIVFPVRKFCFAITSRIKARKNGAGLLKLHNDIQTCGYEDVQVMWEMLRKTESELMS--- 283
           K++FPVR+   A+++R++ARKNGAGLL+LHND+QTCGYEDVQVMWE+LR++ESELM+   
Sbjct: 4   KMIFPVRRVWLAVSARLRARKNGAGLLELHNDVQTCGYEDVQVMWEILRRSESELMASLP 63

Query: 284 KRKQRPFWRIFVWHNH 331
           KRKQRPFWR+FVW NH
Sbjct: 64  KRKQRPFWRVFVWSNH 79


>ref|XP_002512777.1| conserved hypothetical protein [Ricinus communis]
           gi|223547788|gb|EEF49280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score =  120 bits (300), Expect = 3e-25
 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 3/80 (3%)
 Frame = +2

Query: 98  MDCWEKIVFPVRKFCFAITSRIKARKNGAGLLKLHNDIQTCGYEDVQVMWEMLRKTESEL 277
           MD W+K++FPVRK  FA++SR+K R +GAGLLKL ND+QTCGYEDVQVMWEMLR++ESE 
Sbjct: 1   MDWWDKMIFPVRKVWFAVSSRLKPRNHGAGLLKLRNDVQTCGYEDVQVMWEMLRRSESEQ 60

Query: 278 M---SKRKQRPFWRIFVWHN 328
           +   SKRKQR FWR  VW N
Sbjct: 61  IANYSKRKQRSFWRALVWSN 80


>gb|AFK46042.1| unknown [Lotus japonicus]
          Length = 157

 Score =  117 bits (292), Expect = 3e-24
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 3/83 (3%)
 Frame = +2

Query: 92  KVMDCWEKIVFPVRKFCFAITSRIKARKNGAGLLKLHNDIQTCGYEDVQVMWEMLRKTES 271
           K+M  W+ +VFPVR+    ++SR K+ KNGAGLLKL +D+QTCGY DVQVMWE+L++TES
Sbjct: 63  KLMSIWQNMVFPVRRVWLTLSSRFKSSKNGAGLLKLQDDVQTCGYSDVQVMWEILQRTES 122

Query: 272 ELMS---KRKQRPFWRIFVWHNH 331
           E++    KRKQ PFWRIFVW NH
Sbjct: 123 EVIDKCHKRKQLPFWRIFVWSNH 145


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