BLASTX nr result

ID: Panax21_contig00024473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024473
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AED99863.1| squalene synthase [Panax quinquefolius]                273   8e-72
gb|ABA29019.1| squalene synthase [Panax notoginseng]                  272   2e-71
gb|ACV88718.1| squalene synthase [Panax ginseng]                      272   2e-71
emb|CAJ58418.1| squalene synthase [Panax quinquefolius]               272   2e-71
dbj|BAA24289.1| squalene synthase [Panax ginseng] gi|41224629|db...   272   2e-71

>gb|AED99863.1| squalene synthase [Panax quinquefolius]
          Length = 415

 Score =  273 bits (699), Expect = 8e-72
 Identities = 129/132 (97%), Positives = 130/132 (98%)
 Frame = -3

Query: 398 HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 219
           HPDDFYPLLKLK AARHAEKQIP EPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF
Sbjct: 10  HPDDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 69

Query: 218 YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 39
           YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF
Sbjct: 70  YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 129

Query: 38  LELGSGYKEAIE 3
           LELGSGY+EAIE
Sbjct: 130 LELGSGYQEAIE 141


>gb|ABA29019.1| squalene synthase [Panax notoginseng]
          Length = 415

 Score =  272 bits (696), Expect = 2e-71
 Identities = 128/132 (96%), Positives = 130/132 (98%)
 Frame = -3

Query: 398 HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 219
           HPDDFYPLLKLK AARHAEKQIP EPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF
Sbjct: 10  HPDDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 69

Query: 218 YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 39
           YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF
Sbjct: 70  YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 129

Query: 38  LELGSGYKEAIE 3
           LELG+GY+EAIE
Sbjct: 130 LELGNGYQEAIE 141


>gb|ACV88718.1| squalene synthase [Panax ginseng]
          Length = 415

 Score =  272 bits (696), Expect = 2e-71
 Identities = 129/132 (97%), Positives = 130/132 (98%)
 Frame = -3

Query: 398 HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 219
           HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF
Sbjct: 10  HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 69

Query: 218 YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 39
           YLVLRALDTVEDDTSI TEVKVPILMAFHRHIYD DWHFSCGTKEYKVLMDEFHHVSNAF
Sbjct: 70  YLVLRALDTVEDDTSISTEVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMDEFHHVSNAF 129

Query: 38  LELGSGYKEAIE 3
           L+LGSGYKEAIE
Sbjct: 130 LDLGSGYKEAIE 141


>emb|CAJ58418.1| squalene synthase [Panax quinquefolius]
          Length = 415

 Score =  272 bits (696), Expect = 2e-71
 Identities = 129/132 (97%), Positives = 130/132 (98%)
 Frame = -3

Query: 398 HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 219
           HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF
Sbjct: 10  HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 69

Query: 218 YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 39
           YLVLRALDTVEDDTSI TEVKVPILMAFHRHIYD DWHFSCGTKEYKVLMDEFHHVSNAF
Sbjct: 70  YLVLRALDTVEDDTSISTEVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMDEFHHVSNAF 129

Query: 38  LELGSGYKEAIE 3
           L+LGSGYKEAIE
Sbjct: 130 LDLGSGYKEAIE 141


>dbj|BAA24289.1| squalene synthase [Panax ginseng] gi|41224629|dbj|BAD08242.1|
           squalene synthase [Panax ginseng]
          Length = 415

 Score =  272 bits (695), Expect = 2e-71
 Identities = 128/132 (96%), Positives = 130/132 (98%)
 Frame = -3

Query: 398 HPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 219
           HP+DFYPLLKLK AARHAEKQIP EPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF
Sbjct: 10  HPEDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIF 69

Query: 218 YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 39
           YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF
Sbjct: 70  YLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAF 129

Query: 38  LELGSGYKEAIE 3
           LELGSGY+EAIE
Sbjct: 130 LELGSGYQEAIE 141


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