BLASTX nr result

ID: Panax21_contig00024459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024459
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containi...    71   6e-10
ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containi...    71   6e-10
ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containi...    68   4e-09
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi...    61   6e-07
emb|CBI32673.3| unnamed protein product [Vitis vinifera]               61   6e-07

>ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Cucumis sativus]
          Length = 516

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   KGLQRVPGCSWIEIQSEIHVFVTRDRKHDRSDEIYKILWLFFEHAMESQN*SF 161
           KGL+R+PGCSWIEI+S++HVFVT D+ H + DEIY  L  F EH  E ++ +F
Sbjct: 460 KGLKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEIYSALKFFVEHLKEREDFNF 512


>ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Cucumis sativus]
          Length = 516

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   KGLQRVPGCSWIEIQSEIHVFVTRDRKHDRSDEIYKILWLFFEHAMESQN*SF 161
           KGL+R+PGCSWIEI+S++HVFVT D+ H + DEIY  L  F EH  E ++ +F
Sbjct: 460 KGLKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEIYSALKFFVEHLKEREDFNF 512


>ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Glycine max]
          Length = 506

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 26/50 (52%), Positives = 39/50 (78%)
 Frame = +3

Query: 3   KGLQRVPGCSWIEIQSEIHVFVTRDRKHDRSDEIYKILWLFFEHAMESQN 152
           KG++R+PG SWIE++ E+H F+T D+ HD+ DEIY +L  FFEH  E+++
Sbjct: 445 KGMKRIPGSSWIEVRGEVHAFLTGDQNHDKKDEIYLLLNFFFEHLRENED 494


>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Vitis vinifera]
          Length = 538

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = +3

Query: 3   KGLQRVPGCSWIEIQSEIHVFVTRDRKHDRSDEIYKILWLFFEHAMES 146
           K ++ VPG SWIEI+S++H+FVT DR HD+ DEIY++L    +H  E+
Sbjct: 475 KRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQHLRET 522


>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = +3

Query: 3   KGLQRVPGCSWIEIQSEIHVFVTRDRKHDRSDEIYKILWLFFEHAMES 146
           K ++ VPG SWIEI+S++H+FVT DR HD+ DEIY++L    +H  E+
Sbjct: 756 KRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQHLRET 803


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