BLASTX nr result

ID: Panax21_contig00024430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024430
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis...   220   1e-55
ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus ...   214   6e-54
ref|NP_974551.1| SNARE associated Golgi protein [Arabidopsis tha...   206   1e-51
ref|NP_974552.1| SNARE associated Golgi protein [Arabidopsis tha...   206   1e-51
ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|2...   206   1e-51

>ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis vinifera]
           gi|297737027|emb|CBI26228.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score =  220 bits (560), Expect = 1e-55
 Identities = 107/135 (79%), Positives = 122/135 (90%), Gaps = 3/135 (2%)
 Frame = -3

Query: 398 IKAMQCGRVDIKSAPYDTIQLKRGPSWLAKECSEFGPPMFSSSHGLRVPLTSILPQVQLE 219
           IKAMQCGRVDIKSAPYDTI+LK GPSWL K+CSEFGPP+FSS H LRVPL+SILPQVQ+E
Sbjct: 142 IKAMQCGRVDIKSAPYDTIRLKSGPSWLDKDCSEFGPPVFSSLHALRVPLSSILPQVQVE 201

Query: 218 AILWGLGTALGELPPYFISRAASLSGGKLDAMQELDASSTEDD---ATRVNKFKRWFLSH 48
           A+LWG+GTALGELPPYFIS+AASLSG K DA++ELDASS EDD   +T + + KRWFLSH
Sbjct: 202 AVLWGIGTALGELPPYFISKAASLSGSKSDAIEELDASSPEDDGVVSTHLKQIKRWFLSH 261

Query: 47  AQYLNFFTILVLASV 3
           +Q+LNFFTILVLASV
Sbjct: 262 SQHLNFFTILVLASV 276


>ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus communis]
           gi|223543858|gb|EEF45384.1| vacuole membrane protein,
           putative [Ricinus communis]
          Length = 427

 Score =  214 bits (545), Expect = 6e-54
 Identities = 105/135 (77%), Positives = 120/135 (88%), Gaps = 3/135 (2%)
 Frame = -3

Query: 398 IKAMQCGRVDIKSAPYDTIQLKRGPSWLAKECSEFGPPMFSSSHGLRVPLTSILPQVQLE 219
           IKAMQCGRVD+KSA YDTIQLKRGPSWL K+C EFG P+F  SHGLRVPL+SILPQVQ+E
Sbjct: 137 IKAMQCGRVDLKSAIYDTIQLKRGPSWLDKDCHEFGDPVFPLSHGLRVPLSSILPQVQIE 196

Query: 218 AILWGLGTALGELPPYFISRAASLSGGKLDAMQELDASSTEDD---ATRVNKFKRWFLSH 48
           A+LWG+GTALGELPPYFISRAAS+SG K+DAM+EL+ASS+ED    AT +N  KRW LSH
Sbjct: 197 AVLWGVGTALGELPPYFISRAASVSGSKVDAMEELNASSSEDSGFIATHLNAIKRWLLSH 256

Query: 47  AQYLNFFTILVLASV 3
           +Q+LNFFTILVLASV
Sbjct: 257 SQHLNFFTILVLASV 271


>ref|NP_974551.1| SNARE associated Golgi protein [Arabidopsis thaliana]
           gi|332658126|gb|AEE83526.1| SNARE associated Golgi
           protein [Arabidopsis thaliana]
          Length = 355

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/135 (74%), Positives = 115/135 (85%), Gaps = 3/135 (2%)
 Frame = -3

Query: 398 IKAMQCGRVDIKSAPYDTIQLKRGPSWLAKECSEFGPPMFSSSHGLRVPLTSILPQVQLE 219
           +KA  CGRVD+KSAPYDTIQLKR PSWL K CSEFGPP+  S+ G RVPLTSILPQVQLE
Sbjct: 123 LKATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLE 182

Query: 218 AILWGLGTALGELPPYFISRAASLSGGKLDAMQELDASSTEDD---ATRVNKFKRWFLSH 48
           AILWG+GTALGELPPYFISRAAS+SG  +D M+ELD SSTED    AT +N+ KRW L+H
Sbjct: 183 AILWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTH 242

Query: 47  AQYLNFFTILVLASV 3
           +Q+LNFFT+LVLASV
Sbjct: 243 SQHLNFFTVLVLASV 257


>ref|NP_974552.1| SNARE associated Golgi protein [Arabidopsis thaliana]
           gi|332658127|gb|AEE83527.1| SNARE associated Golgi
           protein [Arabidopsis thaliana]
          Length = 406

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/135 (74%), Positives = 115/135 (85%), Gaps = 3/135 (2%)
 Frame = -3

Query: 398 IKAMQCGRVDIKSAPYDTIQLKRGPSWLAKECSEFGPPMFSSSHGLRVPLTSILPQVQLE 219
           +KA  CGRVD+KSAPYDTIQLKR PSWL K CSEFGPP+  S+ G RVPLTSILPQVQLE
Sbjct: 123 LKATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLE 182

Query: 218 AILWGLGTALGELPPYFISRAASLSGGKLDAMQELDASSTEDD---ATRVNKFKRWFLSH 48
           AILWG+GTALGELPPYFISRAAS+SG  +D M+ELD SSTED    AT +N+ KRW L+H
Sbjct: 183 AILWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTH 242

Query: 47  AQYLNFFTILVLASV 3
           +Q+LNFFT+LVLASV
Sbjct: 243 SQHLNFFTVLVLASV 257


>ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|222852344|gb|EEE89891.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/135 (74%), Positives = 115/135 (85%), Gaps = 3/135 (2%)
 Frame = -3

Query: 398 IKAMQCGRVDIKSAPYDTIQLKRGPSWLAKECSEFGPPMFSSSHGLRVPLTSILPQVQLE 219
           IKAMQCGRVD+KSAPYDTIQLKRGPSWL ++C E+G P+F  SHGLRVPL+SILPQVQ+E
Sbjct: 123 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDRDCHEYGDPVFPLSHGLRVPLSSILPQVQVE 182

Query: 218 AILWGLGTALGELPPYFISRAASLSGGKLDAMQELDASSTEDD---ATRVNKFKRWFLSH 48
           AILWG+GTALGELPPYFISRAA +SG  LDAM+ELDASS  D    A R+   K W L+H
Sbjct: 183 AILWGVGTALGELPPYFISRAARMSGSNLDAMEELDASSDGDSGIVAARLKAIKHWLLNH 242

Query: 47  AQYLNFFTILVLASV 3
           +Q+LNFFTILVLASV
Sbjct: 243 SQHLNFFTILVLASV 257


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