BLASTX nr result
ID: Panax21_contig00024413
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024413 (1295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308615.1| predicted protein [Populus trichocarpa] gi|2... 60 9e-07 emb|CBI20884.3| unnamed protein product [Vitis vinifera] 59 3e-06 ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation... 59 3e-06 ref|XP_003636390.1| Eukaryotic translation initiation factor 3 s... 58 6e-06 ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation... 57 8e-06 >ref|XP_002308615.1| predicted protein [Populus trichocarpa] gi|222854591|gb|EEE92138.1| predicted protein [Populus trichocarpa] Length = 466 Score = 60.5 bits (145), Expect = 9e-07 Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 25/171 (14%) Frame = -2 Query: 481 KAYVVAAKLYNQISKPTQNG----EICISLMTRWWF-EPTGNTQLDTSATEK-AXXXXXX 320 K Y + Y QI K + IC+SL + + T N QL EK A Sbjct: 253 KQYHQKSPQYEQILKKNEQMYALLAICLSLCPQVKLVDETVNAQLREKYGEKMARMQRYD 312 Query: 319 XXXGSLKHEDCPLIMKTIVKYGSPTFSEAKEFLVLQIHDDSHILLLELFFYKRKWHQLLF 140 SL E + +P+F E ++ + D++ L L+LF Y+ K QLL Sbjct: 313 DEAFSLYDELFSYACPKFITPSAPSFEEP----LVNYNQDAYRLQLKLFLYEVKQQQLLS 368 Query: 139 GVQNFLKVHSTISLGKLATYKE-------------------VNLEGKVISN 44 GV+ FLKV+STISLGKLA Y E V+ EGK+ISN Sbjct: 369 GVRTFLKVYSTISLGKLANYMEVDEPTLRTILMTYKHKTHAVDSEGKIISN 419 >emb|CBI20884.3| unnamed protein product [Vitis vinifera] Length = 378 Score = 58.9 bits (141), Expect = 3e-06 Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 1/186 (0%) Frame = -2 Query: 622 GMPNVGYIIWVLGIGRLSKSKSYIENTVKFRDKVCNYFFSDQIGKEYKAYVVAAKLYNQI 443 G N+ +V I +K YI T +F K Y + K + Y + A Sbjct: 138 GFANLMLRRYVEAIREFNKILLYIYKTKQFHQKSPQY--EQILKKNEQMYALLA------ 189 Query: 442 SKPTQNGEICISLMTRWWF-EPTGNTQLDTSATEKAXXXXXXXXXGSLKHEDCPLIMKTI 266 IC+SL + E T +QL EK +++ L Sbjct: 190 --------ICLSLCPQEQLVEETVQSQLKEKYGEKMNRMQRYDDEAFALYDE--LFSYAC 239 Query: 265 VKYGSPTFSEAKEFLVLQIHDDSHILLLELFFYKRKWHQLLFGVQNFLKVHSTISLGKLA 86 K+ +P+ +E LV + +++ L L+LF Y+ K QLL GV+ FLKV+STISLGKLA Sbjct: 240 PKFITPSAPVYEEPLV-NYNQEAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGKLA 298 Query: 85 TYKEVN 68 TY EV+ Sbjct: 299 TYMEVD 304 >ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Vitis vinifera] Length = 517 Score = 58.9 bits (141), Expect = 3e-06 Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 1/186 (0%) Frame = -2 Query: 622 GMPNVGYIIWVLGIGRLSKSKSYIENTVKFRDKVCNYFFSDQIGKEYKAYVVAAKLYNQI 443 G N+ +V I +K YI T +F K Y + K + Y + A Sbjct: 277 GFANLMLRRYVEAIREFNKILLYIYKTKQFHQKSPQY--EQILKKNEQMYALLA------ 328 Query: 442 SKPTQNGEICISLMTRWWF-EPTGNTQLDTSATEKAXXXXXXXXXGSLKHEDCPLIMKTI 266 IC+SL + E T +QL EK +++ L Sbjct: 329 --------ICLSLCPQEQLVEETVQSQLKEKYGEKMNRMQRYDDEAFALYDE--LFSYAC 378 Query: 265 VKYGSPTFSEAKEFLVLQIHDDSHILLLELFFYKRKWHQLLFGVQNFLKVHSTISLGKLA 86 K+ +P+ +E LV + +++ L L+LF Y+ K QLL GV+ FLKV+STISLGKLA Sbjct: 379 PKFITPSAPVYEEPLV-NYNQEAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGKLA 437 Query: 85 TYKEVN 68 TY EV+ Sbjct: 438 TYMEVD 443 >ref|XP_003636390.1| Eukaryotic translation initiation factor 3 subunit L [Medicago truncatula] gi|355502325|gb|AES83528.1| Eukaryotic translation initiation factor 3 subunit L [Medicago truncatula] Length = 511 Score = 57.8 bits (138), Expect = 6e-06 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%) Frame = -2 Query: 562 KSYIENTVKFRDKVCNYFFSDQIGKEYKAYVVAAKLYNQISKPTQNG----EICISLMTR 395 + Y++ +F +K+ Y F +YK Y + Y QI K + I +SL + Sbjct: 278 RRYVDAIREF-NKILLYIF------KYKVYHQKSPQYEQILKKNEQMYALLAISLSLCPQ 330 Query: 394 WWF-EPTGNTQLDTSATEKAXXXXXXXXXGSLKHEDCPLIMKTIVKYGSPTFSEAKEFLV 218 + T N+QL EK +++ L K+ +P+ +E LV Sbjct: 331 SRLVDETVNSQLREKYGEKMSRMQRYDDEAFAMYDE--LFSYACPKFITPSAPSFEEPLV 388 Query: 217 LQIHDDSHILLLELFFYKRKWHQLLFGVQNFLKVHSTISLGKLATYKEVN 68 + D++ L L+LF Y+ K QLL G++ FLKV+STISL KLA+Y EV+ Sbjct: 389 -NYNQDAYRLQLKLFLYEAKQQQLLSGLRTFLKVYSTISLAKLASYMEVD 437 >ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Cucumis sativus] gi|449508023|ref|XP_004163195.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Cucumis sativus] Length = 528 Score = 57.4 bits (137), Expect = 8e-06 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 5/143 (3%) Frame = -2 Query: 481 KAYVVAAKLYNQISKPTQNG----EICISLMTRWWF-EPTGNTQLDTSATEKAXXXXXXX 317 K Y + Y QI K + IC+SL + + T N+QL EK Sbjct: 315 KQYHQKSPQYEQILKKNEQMYALLAICVSLCPQGKLVDETVNSQLREKYGEKMIRMQRYD 374 Query: 316 XXGSLKHEDCPLIMKTIVKYGSPTFSEAKEFLVLQIHDDSHILLLELFFYKRKWHQLLFG 137 +++ L K+ +P+ +E LV + D++ L L+LF Y+ K QLL G Sbjct: 375 EEAFAIYDE--LFSYACPKFITPSAPSFEEPLV-NYNQDAYRLQLKLFLYEVKQQQLLSG 431 Query: 136 VQNFLKVHSTISLGKLATYKEVN 68 V+ FLKV+STISLG+LA Y EV+ Sbjct: 432 VRTFLKVYSTISLGQLAIYMEVD 454