BLASTX nr result

ID: Panax21_contig00024402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024402
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   363   e-161
ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric...   362   e-159
ref|XP_004146506.1| PREDICTED: probable E3 ubiquitin-protein lig...   352   e-154
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig...   347   e-154
emb|CBI28495.3| unnamed protein product [Vitis vinifera]              347   e-154

>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  363 bits (932), Expect(2) = e-161
 Identities = 181/270 (67%), Positives = 209/270 (77%), Gaps = 3/270 (1%)
 Frame = +1

Query: 568  IVKVSLGWGHALALTKDGKLFGWGYSADGRLGRIGETLENSPLESRAGMLKMTEEIPSSI 747
            I KVS GWGH LA T +GKLFGWGY ADGRLG++G  +E SPL+S   ++K  E I  S 
Sbjct: 145  IAKVSFGWGHTLAQTVEGKLFGWGYLADGRLGKMGGLVEASPLDSSMNVVKH-EVITQST 203

Query: 748  LESAEKLVLEGMEKEKDMPIIWEPCLIEELCGVEVIDVACGLDHSLILCRDGTLLSGGSN 927
            +E AE+LVLEGMEKEKDMPI+W+PC +EEL GVEV+D+ACGLDHSL+LCRDGTLLS GSN
Sbjct: 204  VEVAERLVLEGMEKEKDMPIVWDPCSVEELKGVEVVDIACGLDHSLVLCRDGTLLSSGSN 263

Query: 928  IYGQLGRVVQDLGLLPVDISFHPISIASGLGHSLAICKNPSAE---DATSIVSWGWNQSS 1098
            +YGQLGR   D+G  PVDISF  ++IASGLGHSLAIC+  S E   DATSIVSWGWNQSS
Sbjct: 264  VYGQLGRANHDMGFFPVDISFPALAIASGLGHSLAICQAKSPEGKGDATSIVSWGWNQSS 323

Query: 1099 QLGRDGPENLPAVVEGLAGEIPFSVSGGRVHSIALTSEAEVWVWXXXXXXXXXXXXXXDE 1278
            QLGR GPEN+P  VEGLAGE    VSGGRVHSIA+TS+ EVWVW              DE
Sbjct: 324  QLGRPGPENVPMEVEGLAGETAILVSGGRVHSIAVTSKGEVWVWGCGRNGRLGIGSSCDE 383

Query: 1279 AEPMLLDYLEGTDVLQAVSGFDHNLVLTTE 1368
            AEP++LD LEG +VLQAVSGFDHNL+L  +
Sbjct: 384  AEPIMLDSLEGCEVLQAVSGFDHNLILIAQ 413



 Score =  231 bits (590), Expect(2) = e-161
 Identities = 107/148 (72%), Positives = 129/148 (87%)
 Frame = +3

Query: 114 LTFGDGSNGALGLPTSVMVMGSDSYQPSPVPALPSDVSGVAAGHFHSLAVTSQGHLWAWG 293
           ++FGDGS+GALGLPTS++  G D+Y+P+PV  LPSD++ V+AGH+HSLAVTS G LWAWG
Sbjct: 1   MSFGDGSHGALGLPTSLIGHGMDAYEPTPVTGLPSDITSVSAGHYHSLAVTSHGQLWAWG 60

Query: 294 RNNEAQLGRGIHSPRETWYEPKRVEGLEQVSVQKAFASGVISAAVGVDGSLWVWGKSKRG 473
           RN+E QLGRG+ SPR+TW EPKRVEGL+QV V  AFASGV+SAA+G DGSLWVWGKSKRG
Sbjct: 61  RNHEVQLGRGLLSPRDTWNEPKRVEGLDQVQVTAAFASGVVSAAIGDDGSLWVWGKSKRG 120

Query: 474 QLGLGKGFTEAVIPSRVEVLAGEEIAKV 557
           QLGLGKG TEA +PS+VE L G++IAKV
Sbjct: 121 QLGLGKGITEASVPSKVEALEGQKIAKV 148


>ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
            gi|223536120|gb|EEF37775.1| cell cycle regulatory
            protein, putative [Ricinus communis]
          Length = 441

 Score =  362 bits (930), Expect(2) = e-159
 Identities = 178/270 (65%), Positives = 213/270 (78%), Gaps = 3/270 (1%)
 Frame = +1

Query: 568  IVKVSLGWGHALALTKDGKLFGWGYSADGRLGRIGETLENSPLESRAGMLKMTEEIPSSI 747
            I KVS GWGHALAL+++GKLFGWGYSADGRLG+I   LE S L+S A      +++P  +
Sbjct: 177  IAKVSFGWGHALALSEEGKLFGWGYSADGRLGKIMGALEVSALDSNAN-----QQVPKLM 231

Query: 748  LESAEKLVLEGMEKEKDMPIIWEPCLIEELCGVEVIDVACGLDHSLILCRDGTLLSGGSN 927
            LE++E+LVLEGMEKE DMPI+W+PCL+EEL G +V+D+ACGLDHSL+LC DGTLLS GSN
Sbjct: 232  LEASERLVLEGMEKENDMPILWDPCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSN 291

Query: 928  IYGQLGRVVQDLGLLPVDISFHPISIASGLGHSLAICKNPSAE---DATSIVSWGWNQSS 1098
            IYGQLGR   ++GL PVD++ HP SIA+GLGHSLAIC+  S++   DA +IVSWGWNQSS
Sbjct: 292  IYGQLGRANHEIGLFPVDLNIHPSSIAAGLGHSLAICRAASSDAEGDARNIVSWGWNQSS 351

Query: 1099 QLGRDGPENLPAVVEGLAGEIPFSVSGGRVHSIALTSEAEVWVWXXXXXXXXXXXXXXDE 1278
            QLGR GPE +P  +EGLAGEIP SVSGGRVHSIALTS+ EVWVW              DE
Sbjct: 352  QLGRLGPEGIPLEIEGLAGEIPVSVSGGRVHSIALTSKGEVWVWGCGKNGRLGLGSSSDE 411

Query: 1279 AEPMLLDYLEGTDVLQAVSGFDHNLVLTTE 1368
            AEP+LLD LEG +VLQ VSGFDHNLVL ++
Sbjct: 412  AEPILLDSLEGYEVLQIVSGFDHNLVLASQ 441



 Score =  228 bits (581), Expect(2) = e-159
 Identities = 115/185 (62%), Positives = 144/185 (77%), Gaps = 8/185 (4%)
 Frame = +3

Query: 27  MMMLR-LVKKEERPLRSLLIGLSRRWISS-------VLTFGDGSNGALGLPTSVMVMGSD 182
           M+ +R L++KE+      L+  +RR ISS       V++FGDGS+GALGLP S+  +G+D
Sbjct: 1   MLRIRALLRKEQN-----LLNATRRCISSFNHRDTIVMSFGDGSHGALGLPNSLTGLGTD 55

Query: 183 SYQPSPVPALPSDVSGVAAGHFHSLAVTSQGHLWAWGRNNEAQLGRGIHSPRETWYEPKR 362
           +Y+P+ V  LPSD+ GV AGH+HSLAVTS G LWAWGRNNEAQLGR I +PR+TW EPKR
Sbjct: 56  AYEPTIVSGLPSDIVGVTAGHYHSLAVTSTGQLWAWGRNNEAQLGRCIPAPRDTWNEPKR 115

Query: 363 VEGLEQVSVQKAFASGVISAAVGVDGSLWVWGKSKRGQLGLGKGFTEAVIPSRVEVLAGE 542
           VEGL +V +  A+ASGV+SAA+  DGSLWVWGKSKRGQLGLGKG TEA +PS++E LAG 
Sbjct: 116 VEGLNKVHILSAYASGVVSAAIANDGSLWVWGKSKRGQLGLGKGITEAFVPSKIEALAGT 175

Query: 543 EIAKV 557
           +IAKV
Sbjct: 176 KIAKV 180


>ref|XP_004146506.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
            sativus] gi|449499975|ref|XP_004160968.1| PREDICTED:
            probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
            sativus]
          Length = 452

 Score =  352 bits (904), Expect(2) = e-154
 Identities = 174/270 (64%), Positives = 207/270 (76%), Gaps = 3/270 (1%)
 Frame = +1

Query: 568  IVKVSLGWGHALALTKDGKLFGWGYSADGRLGRIGETLENSPLESRAGMLKMTEEIPSSI 747
            IVKVS GWGHALA ++DGKLFGWGY ADGRLG +G T++ SPL+S +      +E P+  
Sbjct: 185  IVKVSFGWGHALAFSEDGKLFGWGYYADGRLGNVGRTMKMSPLDSSSYRSTTGQEQPN-- 242

Query: 748  LESAEKLVLEGMEKEKDMPIIWEPCLIEELCGVEVIDVACGLDHSLILCRDGTLLSGGSN 927
            +E AE+LVLE ME+EK+MPIIWEP L+E+   VEV+D+ACGLDHSL+LCRDGTLLS GSN
Sbjct: 243  IELAERLVLESMEEEKNMPIIWEPHLVEDETAVEVVDIACGLDHSLVLCRDGTLLSCGSN 302

Query: 928  IYGQLGRVVQDLGLLPVDISFHPISIASGLGHSLAICK---NPSAEDATSIVSWGWNQSS 1098
            IYGQLGRV QDLGLLPVD SFH  SIA+GLGHSLA+C+   N    DATS++SWGWNQ+S
Sbjct: 303  IYGQLGRVTQDLGLLPVDSSFHVKSIAAGLGHSLALCQDTSNKDIRDATSVISWGWNQTS 362

Query: 1099 QLGRDGPENLPAVVEGLAGEIPFSVSGGRVHSIALTSEAEVWVWXXXXXXXXXXXXXXDE 1278
            QLGR GP N+P  +EGLAGE P S+SGGR HSIAL S+ EVWVW              DE
Sbjct: 363  QLGRVGPNNIPLAIEGLAGETPISLSGGRAHSIALGSKGEVWVWGCGRDGRLGLGSSSDE 422

Query: 1279 AEPMLLDYLEGTDVLQAVSGFDHNLVLTTE 1368
            +EP+ LD LE  +V+QAVSGFDHNLVL  +
Sbjct: 423  SEPVFLDSLENCNVVQAVSGFDHNLVLVVD 452



 Score =  222 bits (566), Expect(2) = e-154
 Identities = 112/181 (61%), Positives = 145/181 (80%), Gaps = 2/181 (1%)
 Frame = +3

Query: 21  ELMMMLRLVKKEERPLRSLLIGLSRRWISS--VLTFGDGSNGALGLPTSVMVMGSDSYQP 194
           E++  +R++ +E+R   S+ I   RR ISS  V++FGDGS+GA+GLPTS+  +G  +Y+P
Sbjct: 9   EMIAGIRILAREQRRGISI-IHFGRRCISSRAVMSFGDGSHGAIGLPTSLTGIGGSAYEP 67

Query: 195 SPVPALPSDVSGVAAGHFHSLAVTSQGHLWAWGRNNEAQLGRGIHSPRETWYEPKRVEGL 374
           + VP LPS V+ VAAGH+HSLA+ SQG LWAWGR++EAQLGRG  SPR++W  PKRV GL
Sbjct: 68  TTVPGLPSHVTTVAAGHYHSLALDSQGCLWAWGRDHEAQLGRGFASPRDSWNVPKRVIGL 127

Query: 375 EQVSVQKAFASGVISAAVGVDGSLWVWGKSKRGQLGLGKGFTEAVIPSRVEVLAGEEIAK 554
           +QV++  AFASGV+SAA+G DGSLW+WGKSKRGQLGLG+  TEAVIPSRV+ L GE+I K
Sbjct: 128 DQVNICSAFASGVVSAALGDDGSLWIWGKSKRGQLGLGEDVTEAVIPSRVQALEGEKIVK 187

Query: 555 V 557
           V
Sbjct: 188 V 188


>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
            vinifera]
          Length = 432

 Score =  347 bits (890), Expect(2) = e-154
 Identities = 178/267 (66%), Positives = 204/267 (76%), Gaps = 3/267 (1%)
 Frame = +1

Query: 568  IVKVSLGWGHALALTKDGKLFGWGYSADGRLGRIGETLENSPLESRAGMLKMTEEIPSSI 747
            IVKVSLGWGHALA T+DGKLFGWGYSADGRLG++G+ LE  PL S A       E+ SS 
Sbjct: 168  IVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVGKALEVFPLNSVAD-----RELSSSK 222

Query: 748  LESAEKLVLEGMEKEKDMPIIWEPCLIEELCGVEVIDVACGLDHSLILCRDGTLLSGGSN 927
            LE AE +VL+G+EKEK+MPIIWEP LIEE  GV ++DVACGLDHSL+LC +G LLSGGSN
Sbjct: 223  LEVAENMVLKGIEKEKNMPIIWEPSLIEEENGVGIVDVACGLDHSLVLCVNGNLLSGGSN 282

Query: 928  IYGQLGRVVQDLGLLPVDISFHPISIASGLGHSLAICKNPSAE---DATSIVSWGWNQSS 1098
            IYGQLGRV QD G++PV  SF PISI+SGLGHSLAIC+  S+E    ATSI+SWGWNQ  
Sbjct: 283  IYGQLGRVAQDYGMVPVTTSFIPISISSGLGHSLAICQVESSEAIGGATSIISWGWNQFF 342

Query: 1099 QLGRDGPENLPAVVEGLAGEIPFSVSGGRVHSIALTSEAEVWVWXXXXXXXXXXXXXXDE 1278
            QLGR GP + P  V+GLAGE P +VSGGR HSIALTS+ EVWVW              DE
Sbjct: 343  QLGRAGPGSCPLAVKGLAGETPVAVSGGRAHSIALTSKGEVWVWGCGKSGRLGLGSSTDE 402

Query: 1279 AEPMLLDYLEGTDVLQAVSGFDHNLVL 1359
             EP LL+YLEG++VLQ  SGFDHNLVL
Sbjct: 403  VEPSLLEYLEGSEVLQVASGFDHNLVL 429



 Score =  225 bits (574), Expect(2) = e-154
 Identities = 104/150 (69%), Positives = 128/150 (85%)
 Frame = +3

Query: 108 SVLTFGDGSNGALGLPTSVMVMGSDSYQPSPVPALPSDVSGVAAGHFHSLAVTSQGHLWA 287
           SV++FGDGS+GALGLP+S++ +G D+Y+P+PVP LPSDV  V+AGH+HSLAVT+QG +WA
Sbjct: 22  SVMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWA 81

Query: 288 WGRNNEAQLGRGIHSPRETWYEPKRVEGLEQVSVQKAFASGVISAAVGVDGSLWVWGKSK 467
           WGRN+E QLGRG+ +PR++W  P RVEGL QV V+ AFASGVIS A+G DGSLWVWGKSK
Sbjct: 82  WGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSK 141

Query: 468 RGQLGLGKGFTEAVIPSRVEVLAGEEIAKV 557
            GQLGLGKG +E V+PSRVE LA E+I KV
Sbjct: 142 HGQLGLGKGISETVVPSRVEALAREKIVKV 171


>emb|CBI28495.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  347 bits (890), Expect(2) = e-154
 Identities = 178/267 (66%), Positives = 204/267 (76%), Gaps = 3/267 (1%)
 Frame = +1

Query: 568  IVKVSLGWGHALALTKDGKLFGWGYSADGRLGRIGETLENSPLESRAGMLKMTEEIPSSI 747
            IVKVSLGWGHALA T+DGKLFGWGYSADGRLG++G+ LE  PL S A       E+ SS 
Sbjct: 162  IVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVGKALEVFPLNSVAD-----RELSSSK 216

Query: 748  LESAEKLVLEGMEKEKDMPIIWEPCLIEELCGVEVIDVACGLDHSLILCRDGTLLSGGSN 927
            LE AE +VL+G+EKEK+MPIIWEP LIEE  GV ++DVACGLDHSL+LC +G LLSGGSN
Sbjct: 217  LEVAENMVLKGIEKEKNMPIIWEPSLIEEENGVGIVDVACGLDHSLVLCVNGNLLSGGSN 276

Query: 928  IYGQLGRVVQDLGLLPVDISFHPISIASGLGHSLAICKNPSAE---DATSIVSWGWNQSS 1098
            IYGQLGRV QD G++PV  SF PISI+SGLGHSLAIC+  S+E    ATSI+SWGWNQ  
Sbjct: 277  IYGQLGRVAQDYGMVPVTTSFIPISISSGLGHSLAICQVESSEAIGGATSIISWGWNQFF 336

Query: 1099 QLGRDGPENLPAVVEGLAGEIPFSVSGGRVHSIALTSEAEVWVWXXXXXXXXXXXXXXDE 1278
            QLGR GP + P  V+GLAGE P +VSGGR HSIALTS+ EVWVW              DE
Sbjct: 337  QLGRAGPGSCPLAVKGLAGETPVAVSGGRAHSIALTSKGEVWVWGCGKSGRLGLGSSTDE 396

Query: 1279 AEPMLLDYLEGTDVLQAVSGFDHNLVL 1359
             EP LL+YLEG++VLQ  SGFDHNLVL
Sbjct: 397  VEPSLLEYLEGSEVLQVASGFDHNLVL 423



 Score =  225 bits (574), Expect(2) = e-154
 Identities = 104/150 (69%), Positives = 128/150 (85%)
 Frame = +3

Query: 108 SVLTFGDGSNGALGLPTSVMVMGSDSYQPSPVPALPSDVSGVAAGHFHSLAVTSQGHLWA 287
           SV++FGDGS+GALGLP+S++ +G D+Y+P+PVP LPSDV  V+AGH+HSLAVT+QG +WA
Sbjct: 16  SVMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWA 75

Query: 288 WGRNNEAQLGRGIHSPRETWYEPKRVEGLEQVSVQKAFASGVISAAVGVDGSLWVWGKSK 467
           WGRN+E QLGRG+ +PR++W  P RVEGL QV V+ AFASGVIS A+G DGSLWVWGKSK
Sbjct: 76  WGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSK 135

Query: 468 RGQLGLGKGFTEAVIPSRVEVLAGEEIAKV 557
            GQLGLGKG +E V+PSRVE LA E+I KV
Sbjct: 136 HGQLGLGKGISETVVPSRVEALAREKIVKV 165


Top