BLASTX nr result

ID: Panax21_contig00024395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024395
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254...   207   2e-51
emb|CAN72245.1| hypothetical protein VITISV_028705 [Vitis vinifera]   207   2e-51
ref|XP_004163832.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   204   1e-50
ref|XP_004141878.1| PREDICTED: uncharacterized protein LOC101207...   200   1e-49
ref|XP_002304313.1| predicted protein [Populus trichocarpa] gi|2...   193   2e-47

>ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254381 [Vitis vinifera]
          Length = 542

 Score =  207 bits (526), Expect = 2e-51
 Identities = 113/181 (62%), Positives = 120/181 (66%), Gaps = 6/181 (3%)
 Frame = -3

Query: 530 MDLSSSF------RPLSTRHTPDXXXXXXXXXXXFQTHLKNLKFINPSSSNFRIFAVAIN 369
           M+LSS F       P S   TPD            Q  LKN K  NP+S  FRI AVA++
Sbjct: 1   MELSSPFIHRQKPNPYSCL-TPDLSFSSSFSPFPLQIDLKNSKSTNPTSLKFRILAVAVD 59

Query: 368 PKELPQNSPQRLLKELAERKKFVSPKKRMPPKRFILKPPLDDKRLAERFLNXXXXXXXXX 189
           PKELPQNSPQRLLKELAERKK  SPKK+ PPKRFILKPPLDD RLA RFLN         
Sbjct: 60  PKELPQNSPQRLLKELAERKKITSPKKKFPPKRFILKPPLDDARLARRFLNSPQLSLKSF 119

Query: 188 XXXXXXXXXXXLNNADKTWIEEYLLEAKQALGYPLEPSDTYEDDNPAKQFDTLLYMAFQH 9
                      LNNADK WI+EYLLEAKQALGYPLEPSD Y DDNPAKQFD LLY+AFQH
Sbjct: 120 PLLSSCLPSSRLNNADKAWIDEYLLEAKQALGYPLEPSDQYGDDNPAKQFDALLYLAFQH 179

Query: 8   P 6
           P
Sbjct: 180 P 180


>emb|CAN72245.1| hypothetical protein VITISV_028705 [Vitis vinifera]
          Length = 518

 Score =  207 bits (526), Expect = 2e-51
 Identities = 113/181 (62%), Positives = 120/181 (66%), Gaps = 6/181 (3%)
 Frame = -3

Query: 530 MDLSSSF------RPLSTRHTPDXXXXXXXXXXXFQTHLKNLKFINPSSSNFRIFAVAIN 369
           M+LSS F       P S   TPD            Q  LKN K  NP+S  FRI AVA++
Sbjct: 1   MELSSPFIHRQKPNPYSCL-TPDLSFSSSFSPFPLQIDLKNSKSTNPTSLKFRILAVAVD 59

Query: 368 PKELPQNSPQRLLKELAERKKFVSPKKRMPPKRFILKPPLDDKRLAERFLNXXXXXXXXX 189
           PKELPQNSPQRLLKELAERKK  SPKK+ PPKRFILKPPLDD RLA RFLN         
Sbjct: 60  PKELPQNSPQRLLKELAERKKITSPKKKFPPKRFILKPPLDDARLARRFLNSPQLSLKSF 119

Query: 188 XXXXXXXXXXXLNNADKTWIEEYLLEAKQALGYPLEPSDTYEDDNPAKQFDTLLYMAFQH 9
                      LNNADK WI+EYLLEAKQALGYPLEPSD Y DDNPAKQFD LLY+AFQH
Sbjct: 120 PLLSSCLPSSRLNNADKAWIDEYLLEAKQALGYPLEPSDQYGDDNPAKQFDALLYLAFQH 179

Query: 8   P 6
           P
Sbjct: 180 P 180


>ref|XP_004163832.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231265 [Cucumis sativus]
          Length = 534

 Score =  204 bits (518), Expect = 1e-50
 Identities = 107/176 (60%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
 Frame = -3

Query: 530 MDLSSSFRPLSTRHTPDXXXXXXXXXXXFQTHLKNLKFINPSSSNFRIFAVAINPK-ELP 354
           M+LSSSF  LS+  +P+            + H  +  F NPSS+N R+FAVA++P+ ELP
Sbjct: 1   MELSSSFVKLSSP-SPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELP 59

Query: 353 QNSPQRLLKELAERKKFVSPKKRMPPKRFILKPPLDDKRLAERFLNXXXXXXXXXXXXXX 174
           +N+PQRLLKELAERK+  SPKK++PP+RFIL+PPLDDKRLAERFLN              
Sbjct: 60  KNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSS 119

Query: 173 XXXXXXLNNADKTWIEEYLLEAKQALGYPLEPSDTYEDDNPAKQFDTLLYMAFQHP 6
                 LNNADKTW++EYLLEAKQALGYPLEPSD+Y DDNPAKQFDTLLY+AFQHP
Sbjct: 120 CLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHP 175


>ref|XP_004141878.1| PREDICTED: uncharacterized protein LOC101207336 [Cucumis sativus]
          Length = 533

 Score =  200 bits (509), Expect = 1e-49
 Identities = 106/176 (60%), Positives = 127/176 (72%), Gaps = 1/176 (0%)
 Frame = -3

Query: 530 MDLSSSFRPLSTRHTPDXXXXXXXXXXXFQTHLKNLKFINPSSSNFRIFAVAINPK-ELP 354
           M+LSSSF  LS+    +            + H  +  F NPSS+N R+FAVA++P+ ELP
Sbjct: 1   MELSSSFVKLSS--PSNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELP 58

Query: 353 QNSPQRLLKELAERKKFVSPKKRMPPKRFILKPPLDDKRLAERFLNXXXXXXXXXXXXXX 174
           +N+PQRLLKELAERK+  SPKK++PP+RFIL+PPLDDKRLAERFLN              
Sbjct: 59  KNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSS 118

Query: 173 XXXXXXLNNADKTWIEEYLLEAKQALGYPLEPSDTYEDDNPAKQFDTLLYMAFQHP 6
                 LNNADKTW++EYLLEAKQALGYPLEPSD+Y DDNPAKQFDTLLY+AFQHP
Sbjct: 119 CLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHP 174


>ref|XP_002304313.1| predicted protein [Populus trichocarpa] gi|222841745|gb|EEE79292.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  193 bits (490), Expect = 2e-47
 Identities = 97/143 (67%), Positives = 111/143 (77%)
 Frame = -3

Query: 434 LKNLKFINPSSSNFRIFAVAINPKELPQNSPQRLLKELAERKKFVSPKKRMPPKRFILKP 255
           ++ LK  + +  N  +FAVAI+P+ELP+NSPQRLLKELAERKK  SPKKR+PPKRFILKP
Sbjct: 29  IRYLKPHHKTLQNLGVFAVAIDPQELPKNSPQRLLKELAERKKTTSPKKRIPPKRFILKP 88

Query: 254 PLDDKRLAERFLNXXXXXXXXXXXXXXXXXXXXLNNADKTWIEEYLLEAKQALGYPLEPS 75
           PLDDKRLA+RFLN                    LNNAD+TWI+EYLLEAKQALGYPLEPS
Sbjct: 89  PLDDKRLAQRFLNSPQLSLKQFPLLSSCLPSSRLNNADQTWIDEYLLEAKQALGYPLEPS 148

Query: 74  DTYEDDNPAKQFDTLLYMAFQHP 6
           D + DDNPAKQFDTLLY+AFQHP
Sbjct: 149 DRFGDDNPAKQFDTLLYLAFQHP 171


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