BLASTX nr result

ID: Panax21_contig00024389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024389
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]   245   1e-62
ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...   238   2e-60
emb|CBI19577.3| unnamed protein product [Vitis vinifera]              230   5e-58
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...   211   2e-52
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...   167   3e-39

>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score =  245 bits (626), Expect = 1e-62
 Identities = 138/281 (49%), Positives = 180/281 (64%), Gaps = 1/281 (0%)
 Frame = +3

Query: 3    HRILVLEGQNELMLTPASFIEINSVMIVNDQYDGKHDSTSAALGLHSVASLETGPISLIS 182
            HRIL L GQN LMLTP SFI INS+ + NDQY+ +  +      L++   L+     LIS
Sbjct: 1188 HRILELGGQNRLMLTPVSFIAINSMKLNNDQYNAECSNPVNVSELYNFVPLDAVSSCLIS 1247

Query: 183  ETRQCLDNMLLRLHCKVVAVYVLVLEKNRGVVHPHPRTYSSPPLVNVPLAGFVLDDGSSS 362
            E  QCL+   ++ HC++VAV+ LVLEKNR      P   S    V++PLA FVLDDGSSS
Sbjct: 1248 ELIQCLECKPMQFHCRIVAVHFLVLEKNRKSQPKVPCRLS----VDIPLASFVLDDGSSS 1303

Query: 363  CCCWATNKRATTLLKLHEVNLFEVLGRTLRRSKQAWLNNARSSKHDRVDKILHQHGRVVV 542
            CCCWA  +RA TLL+LHE    +  G +  + K   ++NA  +    +DK+L +HGR+ V
Sbjct: 1304 CCCWANAERAATLLRLHEEFPLKAFGSSSWKLKGIGIDNACRTTIYHLDKLLKKHGRITV 1363

Query: 543  KNYGSTFDSTLQDLTVSVGADKIISSSDEKFLKFHILNACFGTTFWTVVGSLMDSNATEQ 722
            KNYGS  DS+ QDL  SVG++  +SSSDE  LKF ILNAC G TFWT++G +MDS A  Q
Sbjct: 1364 KNYGSISDSSSQDLMFSVGSNDXLSSSDENLLKFIILNACIG-TFWTIIGDVMDSEAVGQ 1422

Query: 723  LEKRXXXXXXXXXXXXNIWAREVFQPNPVSEARNII-ELLN 842
            LE+             +IWA+EV   NP++EARN++ ELLN
Sbjct: 1423 LEEHVPKMGMTMHXMQSIWAKEVSYXNPLTEARNMVEELLN 1463


>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score =  238 bits (606), Expect = 2e-60
 Identities = 137/292 (46%), Positives = 180/292 (61%), Gaps = 12/292 (4%)
 Frame = +3

Query: 3    HRILVLEGQNELMLTPASFIEINSVMIVNDQYDGKHDSTSAALGLHSVASLETGPISLIS 182
            HRIL L GQN LMLTP SFI INS+ + NDQY+ +  +      L++   L+     LIS
Sbjct: 928  HRILELGGQNRLMLTPVSFIAINSMKLNNDQYNAECSNPVNVSELYNFVPLDAVSSCLIS 987

Query: 183  ETRQCLDNMLLRLHCKVVAVYVLVLEKNRGVVHPHPRTYSSPPLVNVPLAGFVLDDGSSS 362
            E  QCL+   ++ HC++VAV+ LVLEKNR      P   S    V++PLA FVLDDGSSS
Sbjct: 988  ELIQCLECKPMQFHCRIVAVHFLVLEKNRKSQPKVPCRLS----VDIPLASFVLDDGSSS 1043

Query: 363  CCCWATNKRATTLLKLHEVNLFEVLGRTLRRSKQAWLNNARSSKHDRVDKILHQHGRVVV 542
            CCCWA  +RA TLL+LHE    +  G +  + K   ++NA  +    +DK+L +HGR+ V
Sbjct: 1044 CCCWANAERAATLLRLHEEFPLKAFGSSSWKLKGIGIDNACRTTIYHLDKLLKKHGRITV 1103

Query: 543  KNYGSTFDSTLQDLTVSVGADKIISSSDEKFLKFHILNACFGTTFW-----------TVV 689
            KNYGS  DS+ QDL  SVG++ ++SSSDE  LKF ILNAC G TFW           T++
Sbjct: 1104 KNYGSISDSSSQDLMFSVGSNDLLSSSDENLLKFIILNACIG-TFWEAEVIVPFSWQTII 1162

Query: 690  GSLMDSNATEQLEKRXXXXXXXXXXXXNIWAREVFQPNPVSEARNII-ELLN 842
            G +MDS A  QLE+             +IWA+EV   NP++EARN++ ELLN
Sbjct: 1163 GDVMDSEAVGQLEEHVPKMGMTMHSMQSIWAKEVSYVNPLTEARNMVEELLN 1214


>emb|CBI19577.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  230 bits (586), Expect = 5e-58
 Identities = 128/269 (47%), Positives = 171/269 (63%), Gaps = 1/269 (0%)
 Frame = +3

Query: 39  MLTPASFIEINSVMIVNDQYDGKHDSTSAALGLHSVASLETGPISLISETRQCLDNMLLR 218
           MLTP SFI INS+ + NDQY+ +  +      L++   L+     LISE  QCL+   ++
Sbjct: 1   MLTPVSFIAINSMKLNNDQYNAECSNPVNVSELYNFVPLDAVSSCLISELIQCLECKPMQ 60

Query: 219 LHCKVVAVYVLVLEKNRGVVHPHPRTYSSPPLVNVPLAGFVLDDGSSSCCCWATNKRATT 398
            HC++VAV+ LVLEKNR      P   S    V++PLA FVLDDGSSSCCCWA  +RA T
Sbjct: 61  FHCRIVAVHFLVLEKNRKSQPKVPCRLS----VDIPLASFVLDDGSSSCCCWANAERAAT 116

Query: 399 LLKLHEVNLFEVLGRTLRRSKQAWLNNARSSKHDRVDKILHQHGRVVVKNYGSTFDSTLQ 578
           LL+LHE    +  G +  + K   ++NA  +    +DK+L +HGR+ VKNYGS  DS+ Q
Sbjct: 117 LLRLHEEFPLKAFGSSSWKLKGIGIDNACRTTIYHLDKLLKKHGRITVKNYGSISDSSSQ 176

Query: 579 DLTVSVGADKIISSSDEKFLKFHILNACFGTTFWTVVGSLMDSNATEQLEKRXXXXXXXX 758
           DL  SVG++ ++SSSDE  LKF ILNAC G TFWT++G +MDS A  QLE+         
Sbjct: 177 DLMFSVGSNDLLSSSDENLLKFIILNACIG-TFWTIIGDVMDSEAVGQLEEHVPKMGMTM 235

Query: 759 XXXXNIWAREVFQPNPVSEARNII-ELLN 842
               +IWA+EV   NP++EARN++ ELLN
Sbjct: 236 HSMQSIWAKEVSYVNPLTEARNMVEELLN 264


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
            gi|223550977|gb|EEF52463.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1159

 Score =  211 bits (537), Expect = 2e-52
 Identities = 126/288 (43%), Positives = 169/288 (58%), Gaps = 8/288 (2%)
 Frame = +3

Query: 3    HRILVLEGQNELMLTPASFIEINSVMIVNDQYDGKHDSTSAALGLHSVASLETGPISLIS 182
            HRIL   G N+LMLTP SFI +NS+ + N+ +  K     ++  + S +SL+     +IS
Sbjct: 878  HRILKFRGTNKLMLTPVSFIVLNSIRVTNELFTEKCSDIQSS-NISSASSLDNVSSGIIS 936

Query: 183  ETRQCLDNMLLRLHCKVVAVYVLVLEKNRGVVHPHPRTYSSPPLVNVPLAGFVLDDGSSS 362
            E  Q  D   L+ +C+V AV+V+VLEKNR            P  V++PL G VLDDGSS+
Sbjct: 937  ELIQHADGKPLQFNCRVAAVHVVVLEKNRKYYDLPSEVEYRPDFVDIPLVGLVLDDGSST 996

Query: 363  CCCWATNKRATTLLKLHEV---NLFEVLGRTLRR---SKQAWLNNARSSKHDRVDKILHQ 524
            CCCWA  +RA TLL+LHE      FE  G T +     K  W N         +++IL +
Sbjct: 997  CCCWANAERAATLLRLHEELPERAFESSGCTFKWVGIEKSCWKNTVY-----HLERILSK 1051

Query: 525  HGRVVVKNYGSTFDSTLQDLTVSVGADKIISSSDEKFLKFHILNACFGTTFWTVVGSLMD 704
            H  + V+NYGS  +S+ QDL VSV +D  +SSSDE  LKF + NACFG T WTVV ++MD
Sbjct: 1052 HDSITVRNYGSVVESSHQDLRVSVHSDNALSSSDENLLKFILFNACFG-TLWTVVANVMD 1110

Query: 705  SNATEQLEK-RXXXXXXXXXXXXNIWAREVFQPNPVSEARNII-ELLN 842
             NA +QLEK              NIWA+EV   N ++EARN++ ELL+
Sbjct: 1111 PNAVKQLEKEHLMQMEMTVLPIQNIWAKEVRYVNNLTEARNMMRELLD 1158


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score =  167 bits (424), Expect = 3e-39
 Identities = 105/284 (36%), Positives = 157/284 (55%), Gaps = 4/284 (1%)
 Frame = +3

Query: 3    HRILVLEGQNELMLTPASFIEINSVMIVNDQYDGKHDSTSAALGLHSVASLETGPISLIS 182
            HR+L L     LMLTP SFI+INS  +++  +  K+           V+  +T  + L S
Sbjct: 1112 HRVLELGDLRRLMLTPLSFIDINSFSVLDHSFTEKYPDI--------VSYSDTISLQLFS 1163

Query: 183  ETRQCLDNMLLRLHCKVVAVYVLVLEKNRGVVHPHPRTYSSPPLVNVPLAGFVLDDGSSS 362
            +        L +  C+VVAV  LVLEKN   V+         PLV +PLAGF+LDDGSS 
Sbjct: 1164 QLINSSHCKLTKFRCRVVAVNFLVLEKNIDHVNLQVEISPRQPLVKIPLAGFILDDGSSR 1223

Query: 363  CCCWATNKRATTLLKLHE---VNLFEVLGRTLRRSKQAWLNNARSSKHDRVDKILHQHGR 533
            C CWA+ +RA  LL+LH+      F+ + R  + +     +   +S H  + K+L  HGR
Sbjct: 1224 CNCWASGERAAALLRLHDPLPQLAFKNIDRVFKWTGMNHYSPGTASYH--LSKVLKNHGR 1281

Query: 534  VVVKNYGSTFDSTLQDLTVSVGADKIISSSDEKFLKFHILNACFGTTFWTVVGSLMDSNA 713
            ++V++ GS  +S  QDL +S+ +D  +SS++E F+KF I+N+C  +  WT++GS +DS+A
Sbjct: 1282 IIVRSCGSILNS-YQDLDISLASDDALSSANESFIKFIIVNSCI-SAIWTLIGSKLDSDA 1339

Query: 714  TEQLEKRXXXXXXXXXXXXNIWAREVFQPNPVSEARN-IIELLN 842
               L K             NIW  +V + N + EA+N I+EL N
Sbjct: 1340 VRNLLKE-HTLEPWLMESHNIWVTDVHRTNALKEAKNAILELAN 1382


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