BLASTX nr result

ID: Panax21_contig00024383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024383
         (1345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332927.1| predicted protein [Populus trichocarpa] gi|2...    65   5e-08
gb|ABD64980.1| hypothetical protein 25.t00029 [Brassica oleracea]      63   2e-07
emb|CBI41073.3| unnamed protein product [Vitis vinifera]               62   3e-07
ref|XP_002868074.1| hypothetical protein ARALYDRAFT_493145 [Arab...    62   4e-07
ref|NP_193463.1| uncharacterized protein [Arabidopsis thaliana] ...    62   4e-07

>ref|XP_002332927.1| predicted protein [Populus trichocarpa] gi|222833694|gb|EEE72171.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = +3

Query: 222 LCPNQIDIIHQFSLARSLSELGAVLSLLPLHSAVAAARMTSCLSLASGSYRALS*GTL 395
           L P++     +FS +R+  ELG V SLLPLHSAVAA+RMTSCLS  S ++RALS GTL
Sbjct: 46  LLPSKPPTSSRFSFSRAPCELGCVQSLLPLHSAVAASRMTSCLSTTSRNFRALSQGTL 103


>gb|ABD64980.1| hypothetical protein 25.t00029 [Brassica oleracea]
          Length = 109

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 34/48 (70%), Positives = 38/48 (79%)
 Frame = +3

Query: 252 QFSLARSLSELGAVLSLLPLHSAVAAARMTSCLSLASGSYRALS*GTL 395
           +FS +R  SELG V SLLPLHS VAAAR+TSCLS+ S S RALS GTL
Sbjct: 55  RFSFSRCPSELGCVQSLLPLHSTVAAARLTSCLSVTSRSSRALSQGTL 102


>emb|CBI41073.3| unnamed protein product [Vitis vinifera]
          Length = 108

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +3

Query: 246 IHQFSLARSLSELGAVLSLLPLHSAVAAARMTSCLSLASGSYRALS*GTL 395
           + +FS +R+  ELG + SLLPLHSAVAAARMTSCLS  S S +ALS GTL
Sbjct: 52  LRRFSSSRTRGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTL 101


>ref|XP_002868074.1| hypothetical protein ARALYDRAFT_493145 [Arabidopsis lyrata subsp.
           lyrata] gi|297313910|gb|EFH44333.1| hypothetical protein
           ARALYDRAFT_493145 [Arabidopsis lyrata subsp. lyrata]
          Length = 99

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 34/47 (72%), Positives = 36/47 (76%)
 Frame = +3

Query: 255 FSLARSLSELGAVLSLLPLHSAVAAARMTSCLSLASGSYRALS*GTL 395
           FS +R  SELG V SLLPLHS VAAAR+TSCLS  S S RALS GTL
Sbjct: 46  FSFSRCPSELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTL 92


>ref|NP_193463.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15292857|gb|AAK92799.1| unknown protein [Arabidopsis
           thaliana] gi|37202058|gb|AAQ89644.1| At4g17310
           [Arabidopsis thaliana] gi|51969176|dbj|BAD43280.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332658475|gb|AEE83875.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 99

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 34/47 (72%), Positives = 36/47 (76%)
 Frame = +3

Query: 255 FSLARSLSELGAVLSLLPLHSAVAAARMTSCLSLASGSYRALS*GTL 395
           FS +R  SELG V SLLPLHS VAAAR+TSCLS  S S RALS GTL
Sbjct: 46  FSFSRCPSELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTL 92


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