BLASTX nr result

ID: Panax21_contig00024380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024380
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631048.1| hypothetical protein MTR_8g106580 [Medicago ...   122   6e-26
ref|XP_003631035.1| Retinoblastoma-binding protein [Medicago tru...   122   6e-26
ref|XP_002510197.1| conserved hypothetical protein [Ricinus comm...   122   6e-26
ref|XP_002310135.1| predicted protein [Populus trichocarpa] gi|2...   119   5e-25
ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_003631048.1| hypothetical protein MTR_8g106580 [Medicago truncatula]
           gi|355525070|gb|AET05524.1| hypothetical protein
           MTR_8g106580 [Medicago truncatula]
          Length = 296

 Score =  122 bits (306), Expect = 6e-26
 Identities = 59/101 (58%), Positives = 75/101 (74%)
 Frame = -3

Query: 648 ITFGSGSIKKFYQSRKSQRSVSALVVGNKVXXXXXXXXXXXXXXXXSVPVPLKLNFVVRS 469
           I  G+G++KKFYQSR+SQR VS  V+G+K+                ++PVPLKL+F +RS
Sbjct: 196 IVIGTGNMKKFYQSRRSQRLVSVAVMGSKIPLYGSGASLSSTTGMPTLPVPLKLSFEIRS 255

Query: 468 SAYVLGKLVKPKFYKKIECSVVYDPKKHNVSISLKNSCTYN 346
            AYVLGKLVKPK+YKK+ CSVV+DPKK NVS+SLK SCTY+
Sbjct: 256 RAYVLGKLVKPKYYKKVHCSVVFDPKKINVSVSLKKSCTYD 296


>ref|XP_003631035.1| Retinoblastoma-binding protein [Medicago truncatula]
           gi|355525057|gb|AET05511.1| Retinoblastoma-binding
           protein [Medicago truncatula]
          Length = 311

 Score =  122 bits (306), Expect = 6e-26
 Identities = 59/101 (58%), Positives = 75/101 (74%)
 Frame = -3

Query: 648 ITFGSGSIKKFYQSRKSQRSVSALVVGNKVXXXXXXXXXXXXXXXXSVPVPLKLNFVVRS 469
           I  G+G++KKFYQSR+SQR VS  V+G+K+                ++PVPLKL+F +RS
Sbjct: 211 IVIGTGNMKKFYQSRRSQRLVSVAVMGSKIPLYGSGASLSSTTGMPTLPVPLKLSFEIRS 270

Query: 468 SAYVLGKLVKPKFYKKIECSVVYDPKKHNVSISLKNSCTYN 346
            AYVLGKLVKPK+YKK+ CSVV+DPKK NVS+SLK SCTY+
Sbjct: 271 RAYVLGKLVKPKYYKKVHCSVVFDPKKINVSVSLKKSCTYD 311


>ref|XP_002510197.1| conserved hypothetical protein [Ricinus communis]
           gi|223550898|gb|EEF52384.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 319

 Score =  122 bits (306), Expect = 6e-26
 Identities = 61/101 (60%), Positives = 73/101 (72%)
 Frame = -3

Query: 648 ITFGSGSIKKFYQSRKSQRSVSALVVGNKVXXXXXXXXXXXXXXXXSVPVPLKLNFVVRS 469
           IT  SG++KKFYQSRKSQRSV+  V+ NK+                ++PVPLKL+FV+RS
Sbjct: 219 ITIASGAVKKFYQSRKSQRSVAISVMSNKIPLYGSGAGFSSSTGTTALPVPLKLSFVLRS 278

Query: 468 SAYVLGKLVKPKFYKKIECSVVYDPKKHNVSISLKNSCTYN 346
            AYVLGKLVKPKFYK+IEC   +DPKK NV ISLK SCTY+
Sbjct: 279 RAYVLGKLVKPKFYKRIECDFTFDPKKLNVPISLKKSCTYD 319


>ref|XP_002310135.1| predicted protein [Populus trichocarpa] gi|222853038|gb|EEE90585.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  119 bits (298), Expect = 5e-25
 Identities = 60/100 (60%), Positives = 72/100 (72%)
 Frame = -3

Query: 648 ITFGSGSIKKFYQSRKSQRSVSALVVGNKVXXXXXXXXXXXXXXXXSVPVPLKLNFVVRS 469
           +T  +G+I KFYQSRKSQR+++ +V G+K+                + PVPL LNF+VRS
Sbjct: 221 LTVATGTISKFYQSRKSQRTLTVMVKGSKIPLYGGGASLSSLNGAPTQPVPLILNFMVRS 280

Query: 468 SAYVLGKLVKPKFYKKIECSVVYDPKKHNVSISLKNSCTY 349
            AYVLGKLVKPKFYK+IECSVV DPKK NV ISLKN CTY
Sbjct: 281 RAYVLGKLVKPKFYKRIECSVVMDPKKMNVPISLKNKCTY 320


>ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|222835472|gb|EEE73907.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/101 (58%), Positives = 72/101 (71%)
 Frame = -3

Query: 648 ITFGSGSIKKFYQSRKSQRSVSALVVGNKVXXXXXXXXXXXXXXXXSVPVPLKLNFVVRS 469
           IT  SGSIKKFYQSRKSQRSV+  ++ +K+                ++PVPLK+NFVVRS
Sbjct: 218 ITLASGSIKKFYQSRKSQRSVAISLISDKIPLYGSGAAFSSSTGTATLPVPLKVNFVVRS 277

Query: 468 SAYVLGKLVKPKFYKKIECSVVYDPKKHNVSISLKNSCTYN 346
            AYVLGKLVKPKF K+IEC   +DPKK NV ISL+ +CTY+
Sbjct: 278 KAYVLGKLVKPKFNKRIECDFTFDPKKLNVPISLQKACTYD 318


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