BLASTX nr result

ID: Panax21_contig00024361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024361
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]          106   2e-21
ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [C...   102   6e-21
ref|XP_002509880.1| 50S ribosomal protein L25, putative [Ricinus...   103   1e-20
ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [V...   100   2e-20
ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis ...   100   2e-20

>gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]
          Length = 251

 Score =  106 bits (264), Expect(2) = 2e-21
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +1

Query: 1   GLKKGSYLNIIKRKVKYLCPADVIPPYIEVDLSELDVGQKLVMGDLKVHPTLKL 162
           GLKKGSYLNIIKR VKYLCPADVIPPYI+VDLSELDVGQKLVMGDLKVHP LKL
Sbjct: 175 GLKKGSYLNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLVMGDLKVHPALKL 228



 Score = 21.2 bits (43), Expect(2) = 2e-21
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 276 PVCKIMGARV 305
           PV KIMGARV
Sbjct: 235 PVVKIMGARV 244


>ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
           gi|449494761|ref|XP_004159639.1| PREDICTED: 50S
           ribosomal protein L25-like [Cucumis sativus]
          Length = 260

 Score =  102 bits (255), Expect(2) = 6e-21
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = +1

Query: 1   GLKKGSYLNIIKRKVKYLCPADVIPPYIEVDLSELDVGQKLVMGDLKVHPTLKL 162
           GL+KGSYLN IKR VKYLCPAD+IPPYI+VDLSELDVGQKLVMGDLKVHP LKL
Sbjct: 183 GLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL 236



 Score = 22.7 bits (47), Expect(2) = 6e-21
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 276 PVCKIMGARV 305
           PVCKI GARV
Sbjct: 243 PVCKIAGARV 252


>ref|XP_002509880.1| 50S ribosomal protein L25, putative [Ricinus communis]
           gi|223549779|gb|EEF51267.1| 50S ribosomal protein L25,
           putative [Ricinus communis]
          Length = 252

 Score =  103 bits (257), Expect(2) = 1e-20
 Identities = 48/54 (88%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   GLKKGSYLNIIKRKVKYLCPADVIPPYIEVDLSELDVGQKLVMGDLKVHPTLKL 162
           GL+KGSYLNIIKR VK+LCPAD+IPPYI+VDLSELDVGQKLVMGDLKVHP+LKL
Sbjct: 176 GLRKGSYLNIIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPSLKL 229



 Score = 21.2 bits (43), Expect(2) = 1e-20
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 276 PVCKIMGARV 305
           PV KIMGARV
Sbjct: 236 PVVKIMGARV 245


>ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
           gi|297735240|emb|CBI17602.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  100 bits (249), Expect(2) = 2e-20
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   GLKKGSYLNIIKRKVKYLCPADVIPPYIEVDLSELDVGQKLVMGDLKVHPTLKL 162
           GLKKG+YLN IKR VKYLCPAD+IPPYI+VDLSELD GQK+VMGDLKVHP LKL
Sbjct: 182 GLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKL 235



 Score = 23.5 bits (49), Expect(2) = 2e-20
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 276 PVCKIMGARV 305
           PVCKIMG RV
Sbjct: 242 PVCKIMGTRV 251


>ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
           gi|297742259|emb|CBI34408.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  100 bits (249), Expect(2) = 2e-20
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   GLKKGSYLNIIKRKVKYLCPADVIPPYIEVDLSELDVGQKLVMGDLKVHPTLKL 162
           GLKKG+YLN IKR VKYLCPAD+IPPYI+VDLSELD GQK+VMGDLKVHP LKL
Sbjct: 182 GLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKL 235



 Score = 23.5 bits (49), Expect(2) = 2e-20
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 276 PVCKIMGARV 305
           PVCKIMG RV
Sbjct: 242 PVCKIMGTRV 251


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