BLASTX nr result
ID: Panax21_contig00024358
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024358 (568 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 122 4e-26 gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 120 1e-25 gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 120 1e-25 emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana] 120 1e-25 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 120 1e-25 >gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] Length = 1291 Score = 122 bits (306), Expect = 4e-26 Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Frame = -1 Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155 E S+ Q +K L + R K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KGVD+ Sbjct: 48 EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQ 107 Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2 VK++RLQTLR EFEA MKEGE VSDYF R+L++ N LK NGEK++DVR++ Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158 >gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1352 Score = 120 bits (302), Expect = 1e-25 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Frame = -1 Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155 E S+ Q +K L + R K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+ Sbjct: 48 EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 107 Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2 VK++RLQTLR EFEA MKEGE VSDYF R+L++ N LK NGEK++DVR++ Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158 >gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana] gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1320 Score = 120 bits (302), Expect = 1e-25 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Frame = -1 Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155 E S+ Q +K L + R K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+ Sbjct: 48 EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 107 Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2 VK++RLQTLR EFEA MKEGE VSDYF R+L++ N LK NGEK++DVR++ Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158 >emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana] Length = 544 Score = 120 bits (302), Expect = 1e-25 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Frame = -1 Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155 E S+ Q +K L + R K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+ Sbjct: 64 EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 123 Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2 VK++RLQTLR EFEA MKEGE VSDYF R+L++ N LK NGEK++DVR++ Sbjct: 124 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 174 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 120 bits (302), Expect = 1e-25 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Frame = -1 Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155 E S+ Q +K L + R K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+ Sbjct: 48 EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 107 Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2 VK++RLQTLR EFEA MKEGE VSDYF R+L++ N LK NGEK++DVR++ Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158