BLASTX nr result

ID: Panax21_contig00024358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024358
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             122   4e-26
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   120   1e-25
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   120   1e-25
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]         120   1e-25
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         120   1e-25

>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  122 bits (306), Expect = 4e-26
 Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
 Frame = -1

Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155
           E S+ Q +K  L   + R  K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KGVD+
Sbjct: 48  EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQ 107

Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2
           VK++RLQTLR EFEA  MKEGE VSDYF R+L++ N LK NGEK++DVR++
Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  120 bits (302), Expect = 1e-25
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
 Frame = -1

Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155
           E S+ Q +K  L   + R  K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+
Sbjct: 48  EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 107

Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2
           VK++RLQTLR EFEA  MKEGE VSDYF R+L++ N LK NGEK++DVR++
Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  120 bits (302), Expect = 1e-25
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
 Frame = -1

Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155
           E S+ Q +K  L   + R  K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+
Sbjct: 48  EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 107

Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2
           VK++RLQTLR EFEA  MKEGE VSDYF R+L++ N LK NGEK++DVR++
Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score =  120 bits (302), Expect = 1e-25
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
 Frame = -1

Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155
           E S+ Q +K  L   + R  K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+
Sbjct: 64  EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 123

Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2
           VK++RLQTLR EFEA  MKEGE VSDYF R+L++ N LK NGEK++DVR++
Sbjct: 124 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 174


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  120 bits (302), Expect = 1e-25
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
 Frame = -1

Query: 331 ELSIQQNRKM-LSQIKGRKTKTLFLIYQAVDDSTFEKIAKAKTSKQAWDTLGTIFKGVDR 155
           E S+ Q +K  L   + R  K L LIYQ +D+ TFEK+ +A ++K+AW+ L T +KG D+
Sbjct: 48  EGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQ 107

Query: 154 VKRLRLQTLRAEFEAAHMKEGESVSDYFFRLLSIVNQLKGNGEKIEDVRVV 2
           VK++RLQTLR EFEA  MKEGE VSDYF R+L++ N LK NGEK++DVR++
Sbjct: 108 VKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIM 158


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