BLASTX nr result

ID: Panax21_contig00024356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024356
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318543.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-51
ref|XP_002321481.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_004137481.1| PREDICTED: AP-3 complex subunit delta-like [...   199   4e-49
ref|XP_003630870.1| AP-3 complex subunit delta-1 [Medicago trunc...   194   9e-48
ref|XP_002894132.1| delta-adaptin [Arabidopsis lyrata subsp. lyr...   193   3e-47

>ref|XP_002318543.1| predicted protein [Populus trichocarpa] gi|222859216|gb|EEE96763.1|
           predicted protein [Populus trichocarpa]
          Length = 968

 Score =  206 bits (524), Expect = 3e-51
 Identities = 109/159 (68%), Positives = 134/159 (84%)
 Frame = -1

Query: 478 MSGPSLMVSLFQRTLDDLIKGLRLHLPGADTTAFISKSVDEIRREVKSTDLATKSTALQK 299
           M+ PSLM +LFQR+LDD+IKGLR H    ++T FISK ++EIRRE+K+TDL TKSTALQK
Sbjct: 1   MASPSLMDTLFQRSLDDIIKGLR-HQQSTEST-FISKVIEEIRREIKTTDLQTKSTALQK 58

Query: 298 LTYLHSLHAIDMSSWASFHAIELTSSPSFSHKKIGYLAVSLSFNSSTDVVLLLTNQLRKD 119
           LTYL+S+H+IDMS WASFHAIE  SSP+F+HKKIGYLA+S SFN ST V+LL+TNQLRKD
Sbjct: 59  LTYLNSIHSIDMS-WASFHAIECISSPTFAHKKIGYLAISQSFNESTPVILLITNQLRKD 117

Query: 118 LSSANEFEVSLALETLSTICTPDLARDLTPNISTLLTSN 2
           L+S NEFEVSLAL+ LS I T DL RDLT  + TL++++
Sbjct: 118 LNSGNEFEVSLALDCLSRIGTVDLCRDLTSEVFTLMSTS 156


>ref|XP_002321481.1| predicted protein [Populus trichocarpa] gi|222868477|gb|EEF05608.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  204 bits (519), Expect = 1e-50
 Identities = 108/159 (67%), Positives = 131/159 (82%)
 Frame = -1

Query: 478 MSGPSLMVSLFQRTLDDLIKGLRLHLPGADTTAFISKSVDEIRREVKSTDLATKSTALQK 299
           M+ PSLM +LFQR+LDD+IKG+R      ++  FISK ++EIRRE+KSTDL TKSTALQK
Sbjct: 3   MASPSLMDTLFQRSLDDIIKGVRQQQSSTESI-FISKVIEEIRREIKSTDLRTKSTALQK 61

Query: 298 LTYLHSLHAIDMSSWASFHAIELTSSPSFSHKKIGYLAVSLSFNSSTDVVLLLTNQLRKD 119
           LTYL+S+H IDMS WASFHAIE  SSP+FSHKKIGYLA+S SFN ST V+LL++NQLRKD
Sbjct: 62  LTYLNSIHFIDMS-WASFHAIECISSPTFSHKKIGYLAISQSFNESTPVILLISNQLRKD 120

Query: 118 LSSANEFEVSLALETLSTICTPDLARDLTPNISTLLTSN 2
           L S+NEFEVSLAL+ LS I T DL RDLT  + TL++S+
Sbjct: 121 LKSSNEFEVSLALDCLSRIGTVDLCRDLTSEVFTLMSSS 159


>ref|XP_004137481.1| PREDICTED: AP-3 complex subunit delta-like [Cucumis sativus]
           gi|449503121|ref|XP_004161844.1| PREDICTED: AP-3 complex
           subunit delta-like [Cucumis sativus]
          Length = 977

 Score =  199 bits (506), Expect = 4e-49
 Identities = 109/158 (68%), Positives = 128/158 (81%)
 Frame = -1

Query: 478 MSGPSLMVSLFQRTLDDLIKGLRLHLPGADTTAFISKSVDEIRREVKSTDLATKSTALQK 299
           M+G SLM +LFQRTLDDLIKGLRL L G   +AFISK++DEIRRE+KSTD  TKSTALQK
Sbjct: 1   MAGSSLMDTLFQRTLDDLIKGLRLQLIGE--SAFISKAMDEIRREIKSTDPQTKSTALQK 58

Query: 298 LTYLHSLHAIDMSSWASFHAIELTSSPSFSHKKIGYLAVSLSFNSSTDVVLLLTNQLRKD 119
           L+YL SLH IDM+ WA+FH +E+ SS  F+ KKIGY A S SF+ +T V+LL+TNQLRKD
Sbjct: 59  LSYLSSLHGIDMN-WAAFHVVEVMSSSRFAQKKIGYHAASQSFHEATPVLLLITNQLRKD 117

Query: 118 LSSANEFEVSLALETLSTICTPDLARDLTPNISTLLTS 5
           L+S NEFEVSLAL+ LS   T DLARDLTP I TLL+S
Sbjct: 118 LTSTNEFEVSLALDCLSKFATVDLARDLTPEIFTLLSS 155


>ref|XP_003630870.1| AP-3 complex subunit delta-1 [Medicago truncatula]
           gi|355524892|gb|AET05346.1| AP-3 complex subunit delta-1
           [Medicago truncatula]
          Length = 968

 Score =  194 bits (494), Expect = 9e-48
 Identities = 106/158 (67%), Positives = 124/158 (78%)
 Frame = -1

Query: 475 SGPSLMVSLFQRTLDDLIKGLRLHLPGADTTAFISKSVDEIRREVKSTDLATKSTALQKL 296
           S  S+M +LFQRTLDDLIK +RL L     ++FISKS++EIRRE+KSTD  TKSTALQKL
Sbjct: 5   SSSSIMDNLFQRTLDDLIKSMRLQL--LTESSFISKSIEEIRREIKSTDPQTKSTALQKL 62

Query: 295 TYLHSLHAIDMSSWASFHAIELTSSPSFSHKKIGYLAVSLSFNSSTDVVLLLTNQLRKDL 116
           TYL S+H IDMS WASFH +E+ SS  F HK+IGY A S+SFN ST V+LL+TNQLRKDL
Sbjct: 63  TYLSSIHGIDMS-WASFHVVEVMSSSLFLHKRIGYHAASVSFNDSTPVLLLITNQLRKDL 121

Query: 115 SSANEFEVSLALETLSTICTPDLARDLTPNISTLLTSN 2
           SS N F  SLAL  LSTI T DLARDLTP+I  LL+S+
Sbjct: 122 SSTNHFHASLALHCLSTIATLDLARDLTPDIFNLLSSS 159


>ref|XP_002894132.1| delta-adaptin [Arabidopsis lyrata subsp. lyrata]
           gi|297339974|gb|EFH70391.1| delta-adaptin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 863

 Score =  193 bits (490), Expect = 3e-47
 Identities = 101/158 (63%), Positives = 127/158 (80%)
 Frame = -1

Query: 475 SGPSLMVSLFQRTLDDLIKGLRLHLPGADTTAFISKSVDEIRREVKSTDLATKSTALQKL 296
           S  S+M +LFQR+L+DLIKG RL L G     FIS++++EIRRE+KSTDL+TKSTAL KL
Sbjct: 4   SSTSIMDNLFQRSLEDLIKGFRLQLLGESN--FISRALEEIRREIKSTDLSTKSTALHKL 61

Query: 295 TYLHSLHAIDMSSWASFHAIELTSSPSFSHKKIGYLAVSLSFNSSTDVVLLLTNQLRKDL 116
           +YL +LH +DMS WA+FHA+E+ SS  F HK+IGY A++ SFN  T V+LL+TNQ+RKDL
Sbjct: 62  SYLAALHGVDMS-WAAFHAVEVVSSSRFQHKRIGYQAITQSFNDQTSVMLLITNQVRKDL 120

Query: 115 SSANEFEVSLALETLSTICTPDLARDLTPNISTLLTSN 2
           +SANE+EVSLALE LS I T DLARDLTP + TLL S+
Sbjct: 121 NSANEYEVSLALECLSRIGTHDLARDLTPEVFTLLASS 158


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