BLASTX nr result

ID: Panax21_contig00024355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024355
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328934.1| predicted protein [Populus trichocarpa] gi|2...   125   6e-27
ref|XP_002298649.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_004168841.1| PREDICTED: LOW QUALITY PROTEIN: probable S-a...   120   1e-25
ref|XP_004148004.1| PREDICTED: probable S-acyltransferase At3g26...   120   1e-25
ref|XP_002512891.1| zinc finger protein, putative [Ricinus commu...   120   1e-25

>ref|XP_002328934.1| predicted protein [Populus trichocarpa] gi|222839364|gb|EEE77701.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  125 bits (313), Expect = 6e-27
 Identities = 62/88 (70%), Positives = 70/88 (79%), Gaps = 5/88 (5%)
 Frame = -1

Query: 250 MYVVPPPKSSTD-----LRTYQTWKGTNVFLLQGRLIFGPDVRSIFLTIFLIVTPVAIFC 86
           MYVVPPPK S+D     LR YQTWKG+N+F LQGR IFGPDVRS+ LT  LIV PVA+FC
Sbjct: 1   MYVVPPPKGSSDTGSSDLRVYQTWKGSNIFFLQGRFIFGPDVRSLALTTLLIVVPVAVFC 60

Query: 85  GFIGRKLMDVCSDSFGISIMVVAVVFTI 2
            F+ RKLMD  SD +GISIMV+AVVFTI
Sbjct: 61  IFVARKLMDDFSDDWGISIMVIAVVFTI 88


>ref|XP_002298649.1| predicted protein [Populus trichocarpa] gi|222845907|gb|EEE83454.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/93 (66%), Positives = 71/93 (76%), Gaps = 10/93 (10%)
 Frame = -1

Query: 250 MYVVPPPKSSTD----------LRTYQTWKGTNVFLLQGRLIFGPDVRSIFLTIFLIVTP 101
           MYVVPPPK S+D          LR YQTWKG+N+F L+GR IFGPDVRS+ LT+FLIV P
Sbjct: 1   MYVVPPPKGSSDTGSNGVGSGDLRVYQTWKGSNIFFLRGRFIFGPDVRSLALTVFLIVAP 60

Query: 100 VAIFCGFIGRKLMDVCSDSFGISIMVVAVVFTI 2
           VA+FC F+ RKLMD  SD +GISIM VAVVFTI
Sbjct: 61  VALFCIFVARKLMDDFSDDWGISIMAVAVVFTI 93


>ref|XP_004168841.1| PREDICTED: LOW QUALITY PROTEIN: probable S-acyltransferase
           At3g26935-like [Cucumis sativus]
          Length = 450

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/93 (64%), Positives = 70/93 (75%), Gaps = 10/93 (10%)
 Frame = -1

Query: 250 MYVVPPPK----------SSTDLRTYQTWKGTNVFLLQGRLIFGPDVRSIFLTIFLIVTP 101
           MYVVPPP+          +STDLR YQ WKG+N+F LQGR IFGPDVRS+ LTIFLIV P
Sbjct: 1   MYVVPPPQRSDPLSGSSSASTDLRVYQAWKGSNIFFLQGRFIFGPDVRSLVLTIFLIVAP 60

Query: 100 VAIFCGFIGRKLMDVCSDSFGISIMVVAVVFTI 2
           V+IFC F+ +KLMD  S  +GISIMVVAV FT+
Sbjct: 61  VSIFCVFVAKKLMDDFSGDWGISIMVVAVAFTV 93


>ref|XP_004148004.1| PREDICTED: probable S-acyltransferase At3g26935-like [Cucumis
           sativus]
          Length = 450

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/93 (64%), Positives = 70/93 (75%), Gaps = 10/93 (10%)
 Frame = -1

Query: 250 MYVVPPPK----------SSTDLRTYQTWKGTNVFLLQGRLIFGPDVRSIFLTIFLIVTP 101
           MYVVPPP+          +STDLR YQ WKG+N+F LQGR IFGPDVRS+ LTIFLIV P
Sbjct: 1   MYVVPPPQRSDPLSGSSSASTDLRVYQAWKGSNIFFLQGRFIFGPDVRSLVLTIFLIVAP 60

Query: 100 VAIFCGFIGRKLMDVCSDSFGISIMVVAVVFTI 2
           V+IFC F+ +KLMD  S  +GISIMVVAV FT+
Sbjct: 61  VSIFCVFVAKKLMDDFSGDWGISIMVVAVAFTV 93


>ref|XP_002512891.1| zinc finger protein, putative [Ricinus communis]
           gi|223547902|gb|EEF49394.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 443

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/92 (67%), Positives = 68/92 (73%), Gaps = 9/92 (9%)
 Frame = -1

Query: 250 MYVVPPPKSST---------DLRTYQTWKGTNVFLLQGRLIFGPDVRSIFLTIFLIVTPV 98
           MYVVPPP+ S          DLR YQTWKG+N+F LQGR IFGPDVRS+ LTIFLIV PV
Sbjct: 1   MYVVPPPQRSDPGSAGGGSGDLRVYQTWKGSNIFFLQGRFIFGPDVRSLALTIFLIVAPV 60

Query: 97  AIFCGFIGRKLMDVCSDSFGISIMVVAVVFTI 2
           A+FC F+ RKLM   SD  GISIM VAVVFTI
Sbjct: 61  AVFCIFVARKLMKDFSDHLGISIMAVAVVFTI 92


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