BLASTX nr result

ID: Panax21_contig00024338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024338
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex...   157   1e-36
emb|CAB77741.1| putative actin polymerization factor [Arabidopsi...   153   1e-35
ref|NP_567216.1| actin related protein 2/3 complex, subunit 5 [A...   153   1e-35
ref|XP_002875051.1| hypothetical protein ARALYDRAFT_490565 [Arab...   153   2e-35
ref|XP_002275089.1| PREDICTED: actin-related protein 2/3 complex...   152   2e-35

>ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex subunit 5-like
           [Cucumis sativus] gi|449495272|ref|XP_004159784.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           5-like [Cucumis sativus]
          Length = 135

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/78 (93%), Positives = 76/78 (97%)
 Frame = -3

Query: 525 SANWLVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTQ 346
           SANW+VVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLT+
Sbjct: 58  SANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE 117

Query: 345 RAGLGCILRCLTDTINTV 292
           RAGLGCILR L DT+NTV
Sbjct: 118 RAGLGCILRSLADTVNTV 135


>emb|CAB77741.1| putative actin polymerization factor [Arabidopsis thaliana]
          Length = 159

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/78 (89%), Positives = 76/78 (97%)
 Frame = -3

Query: 525 SANWLVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTQ 346
           SANW+VVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLT+
Sbjct: 82  SANWIVVHRALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTE 141

Query: 345 RAGLGCILRCLTDTINTV 292
           RAGLGCILRCLTDTINTV
Sbjct: 142 RAGLGCILRCLTDTINTV 159


>ref|NP_567216.1| actin related protein 2/3 complex, subunit 5 [Arabidopsis thaliana]
           gi|15529135|gb|AAK97662.1| AT4g01710/T15B16_22
           [Arabidopsis thaliana] gi|23505771|gb|AAN28745.1|
           At4g01710/T15B16_22 [Arabidopsis thaliana]
           gi|332656668|gb|AEE82068.1| actin related protein 2/3
           complex, subunit 5 [Arabidopsis thaliana]
          Length = 132

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/78 (89%), Positives = 76/78 (97%)
 Frame = -3

Query: 525 SANWLVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTQ 346
           SANW+VVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLT+
Sbjct: 55  SANWIVVHRALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTE 114

Query: 345 RAGLGCILRCLTDTINTV 292
           RAGLGCILRCLTDTINTV
Sbjct: 115 RAGLGCILRCLTDTINTV 132


>ref|XP_002875051.1| hypothetical protein ARALYDRAFT_490565 [Arabidopsis lyrata subsp.
           lyrata] gi|297320888|gb|EFH51310.1| hypothetical protein
           ARALYDRAFT_490565 [Arabidopsis lyrata subsp. lyrata]
          Length = 132

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/78 (88%), Positives = 76/78 (97%)
 Frame = -3

Query: 525 SANWLVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTQ 346
           SANW+VVHRA+MAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLT+
Sbjct: 55  SANWIVVHRAIMAIKDIDGMLNALDAEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTE 114

Query: 345 RAGLGCILRCLTDTINTV 292
           RAGLGCILRCLTDTINTV
Sbjct: 115 RAGLGCILRCLTDTINTV 132


>ref|XP_002275089.1| PREDICTED: actin-related protein 2/3 complex subunit 5 isoform 1
           [Vitis vinifera] gi|359489190|ref|XP_003633894.1|
           PREDICTED: actin-related protein 2/3 complex subunit 5
           isoform 2 [Vitis vinifera] gi|147771541|emb|CAN73657.1|
           hypothetical protein VITISV_036091 [Vitis vinifera]
           gi|297734591|emb|CBI16642.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  152 bits (385), Expect = 2e-35
 Identities = 70/78 (89%), Positives = 75/78 (96%)
 Frame = -3

Query: 525 SANWLVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTQ 346
           SANW+VVHRA+MAIKDVD +FSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLT+
Sbjct: 58  SANWIVVHRAMMAIKDVDSLFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE 117

Query: 345 RAGLGCILRCLTDTINTV 292
           RAGLGCILR L DT+NTV
Sbjct: 118 RAGLGCILRSLADTVNTV 135


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