BLASTX nr result

ID: Panax21_contig00024317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024317
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64702.1| hypothetical protein VITISV_029781 [Vitis vinifera]    81   8e-27
emb|CBI40073.3| unnamed protein product [Vitis vinifera]               79   2e-26
ref|XP_003618806.1| hypothetical protein MTR_6g023220 [Medicago ...    67   3e-17
ref|XP_003610553.1| hypothetical protein MTR_4g133490 [Medicago ...    57   1e-10
ref|XP_003598077.1| Histone deacetylase complex SIN3 component [...    47   2e-09

>emb|CAN64702.1| hypothetical protein VITISV_029781 [Vitis vinifera]
          Length = 713

 Score = 80.9 bits (198), Expect(2) = 8e-27
 Identities = 40/122 (32%), Positives = 65/122 (53%)
 Frame = -2

Query: 1261 RKMVRWTTNKRRQRTKSCRRADDSENKAWGPWANLPVDLLASIMWQLNIVDYFAFGGVCT 1082
            R M+    ++R     +C++ +   + +W PW+ LP DLL  I  QL+++D+ +F GVC 
Sbjct: 336  RSMMLRQNSERDTNKANCKKINT--DCSWRPWSELPSDLLDVISRQLHMMDHLSFSGVCR 393

Query: 1081 SWKEVATGGKNDFMECQQPLAVVKTKYAKRACFLYNIFDGTRYKTMLSDLTSRHFWGLSC 902
            SW+  A   K D +  Q P  V  + + +   F Y+IF+G +YKT   +   +   G  C
Sbjct: 394  SWRASALPCKKDKIASQPPFLVALSAHVRGRLFFYDIFEGRKYKTEFPNHADKFCCGFCC 453

Query: 901  GY 896
            GY
Sbjct: 454  GY 455



 Score = 67.4 bits (163), Expect(2) = 8e-27
 Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
 Frame = -1

Query: 884  WLVNPFTRQELHFPVLPKNLNF-IVHYEVRPTIFYSTQVSGFF---LIIVSRYMKSIFLS 717
            WLVNPFTR EL FP  P+ +   I+   V P+      +S  +   L     Y+  I L 
Sbjct: 468  WLVNPFTRHELQFPAPPERIRHAIITSSVVPSDSSIVALSADYENLLFCHPGYVNWIVLP 527

Query: 716  LSSGGGVWRRIGLADMGAYLAIVDINIFKGKIYVITCGARIGELK------LYPV---RL 564
            + S   V+              +D+ IFK KIY +T   ++ E+       L PV   R+
Sbjct: 528  VPSKSWVY--------------LDLTIFKKKIYALTSQGKVWEVNPNLNFPLTPVAFRRV 573

Query: 563  LQMYNSGITILDSWNA-SLQLVTSKEDENELLFMIMFR*PHVDLGFRLVTIYKLDNTSMK 387
              + + G+     +   +L LV S+E   ELL + +   PH +       ++KLD    +
Sbjct: 574  PYLDHMGLGRKFGFLCPTLHLVASEE---ELLMVNLI--PHEE-----PQVFKLDFKMKE 623

Query: 386  WVQINDLGKEALFLTHMKGSAVVNTANWGGWRNSVY 279
            WV++  L  + +FL+ +K   V N   WGG  NS+Y
Sbjct: 624  WVKMESLEDKVMFLSDVKCGVVGNPDKWGGCSNSIY 659


>emb|CBI40073.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 79.3 bits (194), Expect(2) = 2e-26
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
 Frame = -2

Query: 1237 NKRRQRTKS-CRRADDSENKAWGPWANLPVDLLASIMWQLNIVDYFAFGGVCTSWKEVAT 1061
            N  R   K+ C++ +   + +W PW+ LP DLL  I  QL+++D+ +F GVC SW+  A 
Sbjct: 57   NSERDTNKANCKKINT--DCSWRPWSELPSDLLDVISRQLHMMDHLSFSGVCRSWRASAL 114

Query: 1060 GGKNDFMECQQPLAVVKTKYAKRACFLYNIFDGTRYKTMLSDLTSRHFWGLSCGY 896
              K D +  Q P  V  + + +   F Y+IF+G +YKT   +   +   G  CGY
Sbjct: 115  PCKKDKIASQPPFLVALSAHVRGRLFFYDIFEGRKYKTEFPNHADKFCCGFCCGY 169



 Score = 67.4 bits (163), Expect(2) = 2e-26
 Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
 Frame = -1

Query: 884 WLVNPFTRQELHFPVLPKNLNF-IVHYEVRPTIFYSTQVSGFF---LIIVSRYMKSIFLS 717
           WLVNPFTR EL FP  P+ +   I+   V P+      +S  +   L     Y+  I L 
Sbjct: 182 WLVNPFTRHELQFPAPPERIRHAIITSSVVPSDSSIVALSADYENLLFCHPGYVNWIVLP 241

Query: 716 LSSGGGVWRRIGLADMGAYLAIVDINIFKGKIYVITCGARIGELK------LYPV---RL 564
           + S   V+              +D+ IFK KIY +T   ++ E+       L PV   R+
Sbjct: 242 VPSKSWVY--------------LDLTIFKKKIYALTSQGKVWEVNPNLNFPLTPVAFRRV 287

Query: 563 LQMYNSGITILDSWNA-SLQLVTSKEDENELLFMIMFR*PHVDLGFRLVTIYKLDNTSMK 387
             + + G+     +   +L LV S+E   ELL + +   PH +       ++KLD    +
Sbjct: 288 PYLDHMGLGRKFGFLCPTLHLVASEE---ELLMVNLI--PHEE-----PQVFKLDFKMKE 337

Query: 386 WVQINDLGKEALFLTHMKGSAVVNTANWGGWRNSVY 279
           WV++  L  + +FL+ +K   V N   WGG  NS+Y
Sbjct: 338 WVKMESLEDKVMFLSDVKCGVVGNPDKWGGCSNSIY 373


>ref|XP_003618806.1| hypothetical protein MTR_6g023220 [Medicago truncatula]
           gi|355493821|gb|AES75024.1| hypothetical protein
           MTR_6g023220 [Medicago truncatula]
          Length = 372

 Score = 66.6 bits (161), Expect(2) = 3e-17
 Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 5/252 (1%)
 Frame = -1

Query: 890 HNWLVNPFTRQELHFPVLPKNLNFIVHYEVRPTIFYSTQVSGFFLIIVS-RYMKSIFLSL 714
           H   +NP    E+ + ++  +     H++    I  +T +S    ++ +    K  +   
Sbjct: 124 HVKFINPLNGHEIRYAIMSFHFRGQPHHD---HIVLATSLSSKSRVLFALSNNKREYKVY 180

Query: 713 SSGGGVWRRIGLADMGAYLAIVDINIFKGKIYVITCGARIGELKLYPVRLLQMYNSGITI 534
            SG G W   G+ D+     + DI IF+ K+Y++T  A  GELK+        +     I
Sbjct: 181 HSGVGKWY-YGVYDVN----VTDIAIFRNKVYLVTSEADFGELKINIADASFAWMPVHQI 235

Query: 533 LDSWNASLQLVTSKEDENELLFMIMFR*PHVDLGFRLVTIYKLDNTSMKWVQINDLGKEA 354
            +  +  L+L+ +    N+ LF++ F      +  + + IY++D  +M W++++DLG +A
Sbjct: 236 PNDDSEDLKLIVT----NDQLFLVDF------VPAKHLNIYEMDFDTMMWIKVSDLGDKA 285

Query: 353 LFLTHMKGSAVVNTANWGGWRNSVYLLVSRINRWSIFPLNHGCRLLKYPVALIATMEPHF 174
           LFL      A+     WG   N VY L +   R  I+ +      L + + L+       
Sbjct: 286 LFLGGKGHCAMRRPGKWGHLSNCVYYLETFPARCCIYSME---SKLIHMIPLVGKSGDQV 342

Query: 173 ----WYFPHECL 150
               WY P +C+
Sbjct: 343 SSLGWYCPDQCM 354



 Score = 49.3 bits (116), Expect(2) = 3e-17
 Identities = 26/90 (28%), Positives = 45/90 (50%)
 Frame = -2

Query: 1165 ANLPVDLLASIMWQLNIVDYFAFGGVCTSWKEVATGGKNDFMECQQPLAVVKTKYAKRAC 986
            A +  +L   I   L++V + AFG VC +W E+    K DF+E Q P  ++K+       
Sbjct: 26   AEIGNELWEEISKGLDVVGFRAFGSVCKTWNEITVRTKEDFLESQSPQVLLKSSNEMDIY 85

Query: 985  FLYNIFDGTRYKTMLSDLTSRHFWGLSCGY 896
            +L ++  G      L + +++ F G + GY
Sbjct: 86   YLCDMSRGKNTTFELDNTSNKSFVGCTGGY 115


>ref|XP_003610553.1| hypothetical protein MTR_4g133490 [Medicago truncatula]
           gi|355511608|gb|AES92750.1| hypothetical protein
           MTR_4g133490 [Medicago truncatula]
          Length = 348

 Score = 56.6 bits (135), Expect(2) = 1e-10
 Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 5/246 (2%)
 Frame = -1

Query: 881 LVNPFTRQELHFPVLPKNLNFIVHYEVRPTIFYSTQVSGFFLIIVSRYMKSIFLSLSSGG 702
           L+NPFTR++         +NF  ++  R  + +      F L+ + +   S+ +  S   
Sbjct: 108 LMNPFTRRKKVINTSTFKVNFS-YFAYRVLLAFDKGSKDFVLVALCKSSNSLHVYQSRNF 166

Query: 701 GVWRRIGLADMGAYLAIVDINIFKGKIYVITCGARIGELKLYPVRLLQMYNSGITILDSW 522
           G W  +  + MG    IVD  +    IYV+   A IG L L    +  +    I  + S 
Sbjct: 167 G-W--VTYSTMGYPWMIVDFVVLHNTIYVVNDKANIGILNLNSANIKFLEMKSIPSVTSL 223

Query: 521 NASLQLVTSKEDENELLFMIMFR*PHVDLGFRLVTIYKLDNTSMKWVQINDLGKEA-LFL 345
           +  L+LV+  E     LF++     H   G  +  +YK+D ++MK+V++  LG  A L+ 
Sbjct: 224 S-HLRLVSCDEQ----LFVV-----HTKPGV-VFNVYKIDFSTMKYVKLKTLGDIALLYA 272

Query: 344 THMKGSAVVNTANWGGWRNSVYLLVSRINRWSIFPLNHGCRLLKY--PVALIATMEPHF- 174
                 A+ N   WG   NSVY+L     +  ++ +    +L KY  P   +  M P++ 
Sbjct: 273 PGGNYYALSNPNRWGYESNSVYVLDRSSTKCRVY-VGDDNKLPKYIGPREGLHIMRPYWL 331

Query: 173 -WYFPH 159
            W F H
Sbjct: 332 DWSFRH 337



 Score = 37.0 bits (84), Expect(2) = 1e-10
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = -2

Query: 1150 DLLASIMWQLNIVDYFAFGGVCTSWKEVATGGKNDFMECQQPLAVVKTKYAKRACFLYNI 971
            D+L  I   L+  D F F  VC +W+        +F+  Q+PL V K+ + K++    +I
Sbjct: 11   DVLDIISKSLDFDDLFQFACVCKNWRAFHKMYWRNFLALQEPLLVQKSSFFKKSFSFISI 70

Query: 970  FDGTRYKTMLSDLTSRHFW-----GLSCGY 896
             +   Y++ + +    +FW     G S GY
Sbjct: 71   PNQKVYRSKMIN----YFWHFAYSGSSSGY 96


>ref|XP_003598077.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
           gi|355487125|gb|AES68328.1| Histone deacetylase complex
           SIN3 component [Medicago truncatula]
          Length = 469

 Score = 47.0 bits (110), Expect(2) = 2e-09
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
 Frame = -1

Query: 881 LVNPFTRQELHFPVLPKNLNFIVHYEVRPTIFYSTQVSGFFLIIVSRYMKSIFLSLSSGG 702
           L+NPFTR++         +N   ++     + +      F L+   +   S+++  S   
Sbjct: 227 LLNPFTRRKKVINTSTFKVNS-TYFAYHVLLAFGKGSEEFVLVASCKSSSSLYVYQSRNL 285

Query: 701 GVWRRIGLADMGAYLAIVDINIFKGKIYVITCGARIGELKLYPVRLLQMYNSGITILDSW 522
           G W  +    MG    +VD  +F   IYV+T  A IG L L    +  +    +  + S 
Sbjct: 286 G-W--VTYLTMGNAWKVVDFVVFHNTIYVVTNEAIIGVLDLNSSNIKFLEMKSMPDVTSM 342

Query: 521 NASLQLVTSKEDENELLFMIMFR*PHVDLGFRLVTIYKLDNTSMKWVQINDLGKEALFLT 342
           +  L+LV     + +LL +      H++    ++ +YK+D ++M +V++  LG  ALF  
Sbjct: 343 S-HLRLVCC---DGQLLVV------HIE-SEEILNVYKIDFSTMNYVKLETLGDIALF-- 389

Query: 341 HMKGS---AVVNTANWGGWRNSVYLL 273
           +  G    A+ N   WG   NS+Y +
Sbjct: 390 YASGEYFYALNNPRRWGFESNSLYAI 415



 Score = 42.7 bits (99), Expect(2) = 2e-09
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
 Frame = -2

Query: 1150 DLLASIMWQLNIVDYFAFGGVCTSWKEVATGGKNDFMECQQPLAVVKTKYAKRACFLYNI 971
            D+L  I   L+  D F F GVC +W+E        F+  Q+PL + K+ + K++    +I
Sbjct: 130  DMLDVISRDLDFDDLFQFSGVCKNWREFHKTYWKKFLASQEPLLIKKSYHDKKSFSFISI 189

Query: 970  FDGTRYKTMLSDLTSRHFW-----GLSCGY 896
             D   Y +     T   FW     G S GY
Sbjct: 190  ADRKVYHSK----TINQFWHFAYFGSSSGY 215


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