BLASTX nr result

ID: Panax21_contig00024297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024297
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory pr...    63   1e-07
gb|AFK36394.1| unknown [Lotus japonicus]                               62   2e-07
ref|XP_003542686.1| PREDICTED: ribosome biogenesis regulatory pr...    62   2e-07
ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory pr...    62   2e-07
gb|ACU24351.1| unknown [Glycine max]                                   62   2e-07

>ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis
           sativus] gi|449476004|ref|XP_004154612.1| PREDICTED:
           ribosome biogenesis regulatory protein homolog [Cucumis
           sativus]
          Length = 329

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 889 LHSHVQLAATALPITGTQAAPRKVSKDELQNVAGMA 996
           L SH+QLAATALPITGTQAAP+K++KDEL NVAGMA
Sbjct: 180 LPSHIQLAATALPITGTQAAPKKITKDELGNVAGMA 215


>gb|AFK36394.1| unknown [Lotus japonicus]
          Length = 351

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +1

Query: 889 LHSHVQLAATALPITGTQAAPRKVSKDELQNVAGMA 996
           L SHVQLAATALPITGTQAAP+KV+KDEL NVAG+A
Sbjct: 184 LPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIA 219


>ref|XP_003542686.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 2
           [Glycine max]
          Length = 286

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +1

Query: 889 LHSHVQLAATALPITGTQAAPRKVSKDELQNVAGMA 996
           L SHVQLAATALPITGTQAAP+KV+KDEL NVAG+A
Sbjct: 137 LPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIA 172


>ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 1
           [Glycine max]
          Length = 332

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +1

Query: 889 LHSHVQLAATALPITGTQAAPRKVSKDELQNVAGMA 996
           L SHVQLAATALPITGTQAAP+KV+KDEL NVAG+A
Sbjct: 183 LPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIA 218


>gb|ACU24351.1| unknown [Glycine max]
          Length = 286

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +1

Query: 889 LHSHVQLAATALPITGTQAAPRKVSKDELQNVAGMA 996
           L SHVQLAATALPITGTQAAP+KV+KDEL NVAG+A
Sbjct: 137 LPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIA 172


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